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SCNpilot_expt_500_bf_scaffold_461_15

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_novel_39_47

near complete RP 46 / 55 MC: 1 BSCG 47 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: comp(14396..14644)

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator {ECO:0000313|EMBL:AIL13032.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.4
  • Coverage: 82.0
  • Bit_score: 132
  • Evalue 3.30e-28
Probable transcriptional regulator id=4408193 bin=GWF2_TM6_28_16 species=GWF2_TM6_27_16 genus=GWF2_TM6_27_16 taxon_order=GWF2_TM6_27_16 taxon_class=GWF2_TM6_27_16 phylum=TM6 tax=GWF2_TM6_28_16 organism_group=TM6 similarity UNIREF
DB: UNIREF100
  • Identity: 71.6
  • Coverage: 67.0
  • Bit_score: 100
  • Evalue 7.50e-19
hypothetical protein; K07727 putative transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 71.6
  • Coverage: 67.0
  • Bit_score: 98
  • Evalue 8.90e-19

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 249
TTGAAAATTATTGTTCGCTTAGATGAGCTGATGGCACGCCGTAAAATGAAACTCAATAAGCTGGCAGAGCTTGTGGGAATTTCTGAAACCAATTTATCGATTTTAAAAACAGGCAAGGCAAAAGCTATAAGATTTTCAACCTTAGAAGCCATTTGTCGTGCTCTTGAATGCCAACCAGGAGATATTTTAGATGTAGAGCAGTTTCTCCCTAAGGTGCAGCATTCTGAAGAAGAGATTGCAGCTTTATAA
PROTEIN sequence
Length: 83
LKIIVRLDELMARRKMKLNKLAELVGISETNLSILKTGKAKAIRFSTLEAICRALECQPGDILDVEQFLPKVQHSEEEIAAL*