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SCNpilot_expt_500_bf_scaffold_461_21

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_novel_39_47

near complete RP 46 / 55 MC: 1 BSCG 47 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: comp(17872..18144)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein HU-beta n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GZZ6_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 74.2
  • Coverage: 89.0
  • Bit_score: 135
  • Evalue 3.00e-29
Transcriptional regulator HU subunit alpha {ECO:0000313|EMBL:AIL13039.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.7
  • Coverage: 90.0
  • Bit_score: 171
  • Evalue 5.30e-40
histone-like DNA-binding protein; K03530 DNA-binding protein HU-beta similarity KEGG
DB: KEGG
  • Identity: 70.8
  • Coverage: 89.0
  • Bit_score: 130
  • Evalue 3.00e-28

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 273
GTGAATAAGAGTGATTTAGTAGCAGAAGTCTCTTCTCTTTCTGGGCTTACAAAAAGTGATGCATCAAAGGCTGTCGATGGTATTTTTGACGCAATTACTCATGCCTTGAAGAAGAATGGTGAAATACGGTTTGTTGGTTTTGGAACATTTACCGTTGTAAAACGTGCAGCCAGTGAAGGTCGTAACCCACGCACAGGCGAAAAGATTAAGATTCCTGCTTCAAAACTTCCTAAGTTTCGTGCAGGTAAAGGCTTAAAAGAAGCTGTTGCTTAG
PROTEIN sequence
Length: 91
VNKSDLVAEVSSLSGLTKSDASKAVDGIFDAITHALKKNGEIRFVGFGTFTVVKRAASEGRNPRTGEKIKIPASKLPKFRAGKGLKEAVA*