ggKbase home page

SCNpilot_expt_500_bf_scaffold_670_24

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_novel_39_47

near complete RP 46 / 55 MC: 1 BSCG 47 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: comp(24482..25399)

Top 3 Functional Annotations

Value Algorithm Source
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.4
  • Coverage: 305.0
  • Bit_score: 580
  • Evalue 1.70e-162
protein-export membrane protein SecF id=4468768 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + similarity UNIREF
DB: UNIREF100
  • Identity: 57.5
  • Coverage: 294.0
  • Bit_score: 355
  • Evalue 4.80e-95
  • rbh
protein-export membrane protein SecD; K12257 SecD/SecF fusion protein similarity KEGG
DB: KEGG
  • Identity: 47.0
  • Coverage: 304.0
  • Bit_score: 300
  • Evalue 7.50e-79

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 918
ATGCGTGGTTTACAGCTCATCCCTTATGATACGAATATTAATTTCGTTGGTATCCGACGTTATATTTATTGCGTATCCCTTGCTATCATTTTGATTTGTGGCTGGAATCTTGCTTTCAAAGGCCTAAATTATGGAATTGATTTTAAAGGCGGCTTTCTTTTAGAAGTTCGTACAAAAGACAAAGCAGATATTGCAAGTATGCGAACACAACTTGAAACCTTGAAACTGGGCGAAGTTAAGTTGCAAGAATTTGGTTCAGATCGCGACATCATGATTAGAATCGAAAAACAGCCCGGTGGAGAGCAAGCTCAAGCCATCGCTTTACAAAAAATTAAAGAAAAACTTGGCAATGATCTTGAATATCGCCGCGTTGAAACTGTGGGTGGTAAAGTCAGTAGTGACCTTGTCGAAAACGGTCTCTGGGCCCTAGGATTTGCTCTTATTGGCATGCTTCTTTATATTTGGGTGCGTTTTGAATGGCATTTTGGTCTTTGCGGTATTCTCGCGCTTGCTCACGATGTTGTTGTTGTCCTTGGCTTTTATTCATTGACGGGTCATGAATTCAAAGAAACAGCTTTTATCGCTATTTTAACAACAATTGGTTACTCTATTAACGATTCGGTTGTTATTTATGATCGCATTCGCGATAATTTACGTAAATACAAAAAAATGCCGGTTGAACAACTCATTAATCAATCAACGAATGAAACCCTCTCTCGTACGATTATTACGGTCGCAACCACTGTTATCTCTCTTCTTGCTTTATATCTTTTTGGAGGTTCAGAAATTTCTTCTTTTAGCCTTCCAATTTTAGTTGGTATTGTTTTTGGTAGTTATTCCTCAATTTTCGTTTCAGCTAACTTATTATTGTTTTTTGATATCCGTAAAACAGCAAAAGAGAAGGAAGCAATAGCTTAA
PROTEIN sequence
Length: 306
MRGLQLIPYDTNINFVGIRRYIYCVSLAIILICGWNLAFKGLNYGIDFKGGFLLEVRTKDKADIASMRTQLETLKLGEVKLQEFGSDRDIMIRIEKQPGGEQAQAIALQKIKEKLGNDLEYRRVETVGGKVSSDLVENGLWALGFALIGMLLYIWVRFEWHFGLCGILALAHDVVVVLGFYSLTGHEFKETAFIAILTTIGYSINDSVVIYDRIRDNLRKYKKMPVEQLINQSTNETLSRTIITVATTVISLLALYLFGGSEISSFSLPILVGIVFGSYSSIFVSANLLLFFDIRKTAKEKEAIA*