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SCNpilot_expt_500_bf_scaffold_906_8

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_novel_39_47

near complete RP 46 / 55 MC: 1 BSCG 47 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: comp(6216..6503)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L28 n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RI09_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 71.9
  • Coverage: 96.0
  • Bit_score: 134
  • Evalue 4.10e-29
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.8
  • Coverage: 95.0
  • Bit_score: 179
  • Evalue 2.70e-42
rpmB; 50S ribosomal protein L28; K02902 large subunit ribosomal protein L28 similarity KEGG
DB: KEGG
  • Identity: 70.8
  • Coverage: 96.0
  • Bit_score: 132
  • Evalue 6.50e-29

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 288
ATGGCACGTCGTTGCATGATAACAGGTAAACAGGTTTTAGCAGGTAATAACGTAAGCCATGCGAATAATAAGACACGGCGTCGTTTCCTACCGAATATACAAAATGTATCATTCATCAGTGATGTTTTGGGGCGCGTAAGAATGCGTATTTCGACACGAGCTATTCGAACCATTGAAACAAATGGGGGGATTGATGCCTTTTTAAAAGGCACAAATGACTCAAAACTATCAAAAGAAGCTCTCGTATTAAAGCGTCGGATAGAACGTGTTCAAGTTCAAAAAGCTTAA
PROTEIN sequence
Length: 96
MARRCMITGKQVLAGNNVSHANNKTRRRFLPNIQNVSFISDVLGRVRMRISTRAIRTIETNGGIDAFLKGTNDSKLSKEALVLKRRIERVQVQKA*