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SCNpilot_expt_500_bf_scaffold_1973_8

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_novel_39_47

near complete RP 46 / 55 MC: 1 BSCG 47 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: comp(6800..7582)

Top 3 Functional Annotations

Value Algorithm Source
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256|RuleBase:RU362024}; tRNA Cm32/Um32 methyltransferase {ECO:0000256|RuleBase:RU362024}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.0
  • Coverage: 235.0
  • Bit_score: 233
  • Evalue 3.30e-58
RNA methyltransferase, TrmH family, group 1; K02533 tRNA/rRNA methyltransferase [EC:2.1.1.-] similarity KEGG
DB: KEGG
  • Identity: 51.2
  • Coverage: 244.0
  • Bit_score: 232
  • Evalue 1.60e-58
Putative tRNA (Cytidine/uridine-2'-O-)-methyltransferase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EXE7_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 54.0
  • Coverage: 235.0
  • Bit_score: 233
  • Evalue 2.30e-58

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Taxonomy

Magnetospirillum gryphiswaldense → Magnetospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 783
ATGATAGGCCCTGTAATTATTCTTGTTGAGTCACAGATCCCCCAAAATATTGGGAAGACAGCGCGCGCGATGCTCAATTGTGAATTGCGTGACCTCAGGCTTGTCAGGCCCCTTGTGGATCCTTGCCATCGCGATGCCCGGGCGTTGGCGGCAGGTGCTGATGAAGTGTTAGAGAACGCCAAAATCTTTAATTCAACAAGTGAAGCGATTGCGGACTTGCATCGTGTCTTTTCAACAAGCGCTCGACATCGAGATATGGTTGAGCTTCAGCTAACCCCCAAAAAAGCCGCAGACCTTTTTGTGGAGATGGTGCAAGAAAATCATCGAATAGGGGTGCTTTTTGGGCCTGAGCGAGCAGGGCTTGATAATGAAGATGTGGCCTTGTGTGAAGGAAATATTTATGTGCCGGTTAATCCCGACTTTAGTTCCCTTAATCTAGCACAAGCCGTTCTCCTTATTGCTTATGAATGGTATCAAGCCAAAGCAAAACACCCTGAGATGACCTTGAAAAAGGGAGAAGCTCCCTTAGCCACACGTGAAGAATTAATAGGGTTTTTAAACCAGCTTGAGACAGAATTGGATCTTTCAGGCTATTTTAGGGCAGACCATAAAAAACCTAAGATGCTTCGGACAATTCATAATATGTTCTCAAGAGTTCCTTTGACGTCTCAAGAGGTTCGGACCTTAAGAGGAATTGTGTCTGATCTTTCTGATCCGCATGGTGAAAGGGCAAGAATGACCCAAAGAAGACTTCAAAAACGTGAAAAAGAGACTAAACTTTAA
PROTEIN sequence
Length: 261
MIGPVIILVESQIPQNIGKTARAMLNCELRDLRLVRPLVDPCHRDARALAAGADEVLENAKIFNSTSEAIADLHRVFSTSARHRDMVELQLTPKKAADLFVEMVQENHRIGVLFGPERAGLDNEDVALCEGNIYVPVNPDFSSLNLAQAVLLIAYEWYQAKAKHPEMTLKKGEAPLATREELIGFLNQLETELDLSGYFRADHKKPKMLRTIHNMFSRVPLTSQEVRTLRGIVSDLSDPHGERARMTQRRLQKREKETKL*