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SCNpilot_expt_500_bf_scaffold_2015_21

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_novel_39_47

near complete RP 46 / 55 MC: 1 BSCG 47 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: comp(17589..18308)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.8
  • Coverage: 239.0
  • Bit_score: 459
  • Evalue 3.40e-126
rph; ribonuclease PH (EC:2.7.7.56); K00989 ribonuclease PH [EC:2.7.7.56] similarity KEGG
DB: KEGG
  • Identity: 67.2
  • Coverage: 238.0
  • Bit_score: 337
  • Evalue 4.30e-90
  • rbh
Ribonuclease PH n=1 Tax=alpha proteobacterium BAL199 RepID=A8U071_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 68.2
  • Coverage: 236.0
  • Bit_score: 341
  • Evalue 9.50e-91
  • rbh

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 720
ATGCGCCCTTCTGGAAGAACAACATCTCAATTGAGAGATATAAGGCTAGAGCCGAACTATGCAAAATATGCTGAAGGATCATGTTTGGTACGTTTTGGCCATACGCATGTCCTTTGCACGGCAACCATTGAAGAAAAGGTGCCACCTTTTGTCAAGGGAACAGGAAGTGGTTGGATTACGGCCGAATATGGTATGCTTCCTCGTGCAACTCAAGTTCGTACAGACCGAGAAGCCGCTCGAGGAAAGCAAACGGGGCGCACGCAAGAAATTCAACGTTTAATTGGACGCTCTCTTCGCTCTATACTTAATTTAACAGCACTTGGCGAAAGACAAATAAAGATAGATTGCGATGTAATTCAGGCAGATGGTGGAACACGTACAGCCTCAATCACGGGTGCATACGTTGCGCTTTATCAAGCAATAGATAAGTTAGTAAAGGAAGGGACACTGAAACAAAATCCTATAGTAGATCAAGTTGCTGCAATTTCCTGTGGGATTTATCAAGGTCAGCCAGTGCTTGATTTAGATTACGATGAAGATTCACAAGCAGAAGCTGATGCGAATTTTGTGCTTACAGGAAAAGGACAGATCATTGAGGTGCAAGCAACCGCTGAAAAAACGCCTTTTGATCAGCATGATTTTGAAGCTTTGATGGAGTTGGCACGCTCTGGGGTTGATACGCTTGTCATGCTGCAACGTAAAGCTCTTGGATTAATTTAA
PROTEIN sequence
Length: 240
MRPSGRTTSQLRDIRLEPNYAKYAEGSCLVRFGHTHVLCTATIEEKVPPFVKGTGSGWITAEYGMLPRATQVRTDREAARGKQTGRTQEIQRLIGRSLRSILNLTALGERQIKIDCDVIQADGGTRTASITGAYVALYQAIDKLVKEGTLKQNPIVDQVAAISCGIYQGQPVLDLDYDEDSQAEADANFVLTGKGQIIEVQATAEKTPFDQHDFEALMELARSGVDTLVMLQRKALGLI*