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SCNpilot_expt_500_bf_scaffold_1802_7

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_novel_39_47

near complete RP 46 / 55 MC: 1 BSCG 47 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: 4637..5482

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QHZ2_SPILD similarity UNIREF
DB: UNIREF100
  • Identity: 63.8
  • Coverage: 282.0
  • Bit_score: 368
  • Evalue 6.50e-99
  • rbh
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 63.8
  • Coverage: 282.0
  • Bit_score: 368
  • Evalue 2.10e-99
  • rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADB36880.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.8
  • Coverage: 282.0
  • Bit_score: 368
  • Evalue 9.20e-99

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Taxonomy

Spirosoma linguale → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 846
ATGAACTTTGATACCGTTGCCTTACATTGTTTTTTAGCCGTGAGCGACAGTAAAAGTTTTACGAAAGCAGCAGAGCAGGTTGGACGTACACAATCTGCAGTTAGTCAGCAAATAACTAAGCTTGAGTATCTTTTGGGTAAGCAACTTTTTAAACGTGGAAAACTACTTTTATTGACCAAAGAAGGTGAGCTATTTTACGGGTACGCTAAACAAATTTTTACGTTACATTGTGAAGTATTTGACCGTTTCAAAGAGCCAGAACTTGAAGGCGAGATTCGTTTTGGTATGCCTGAAGATTTTGCAAGTGTTTATCTTTCAGATGTTCTCATTGAATTCTCAAGAATTCATCCACGTATTTTTTTAAATGTAGAATGTGATTTAACTCTAAATCTTTTTGAAAGATTTAAAAAGGGACACTTTGATTTAGTCCTTGTTAAAATGAGTCGGCCTGAAGAATTTATCAATGGGTATGATATATATACTGAGGATTTAGTATGGATTGGAGATCCCAAATTAATAAAACAAGATATTTCAAAATCTCTTCCGTTAGTTCTCTCTCCTCTTCCATGCGTTTATCGCTCAAGAGCTATTAAAGCTTTAGAAAACTCTGATATTAAATGGCGTTTAGTCTTCTCAAGTCCAAGCTATAACGGAACTATTGCTGCAGTAAAAGCGGGCCTTGGTATAACTGTATTACCTCTAACAATGGTTCCGCCTCAGCTAACCATAATTAAAGAGGGATTGCCCATATTAGATAATACTCATGTTAGCTTATTGAAGCTTGATACTAAAAGCCAAGCCTTAGGAACATTTGAGAAGTTCGTAATAAATAAGCTTAAACATTAA
PROTEIN sequence
Length: 282
MNFDTVALHCFLAVSDSKSFTKAAEQVGRTQSAVSQQITKLEYLLGKQLFKRGKLLLLTKEGELFYGYAKQIFTLHCEVFDRFKEPELEGEIRFGMPEDFASVYLSDVLIEFSRIHPRIFLNVECDLTLNLFERFKKGHFDLVLVKMSRPEEFINGYDIYTEDLVWIGDPKLIKQDISKSLPLVLSPLPCVYRSRAIKALENSDIKWRLVFSSPSYNGTIAAVKAGLGITVLPLTMVPPQLTIIKEGLPILDNTHVSLLKLDTKSQALGTFEKFVINKLKH*