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SCNpilot_expt_500_bf_scaffold_4921_3

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_novel_39_47

near complete RP 46 / 55 MC: 1 BSCG 47 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: 1453..1902

Top 3 Functional Annotations

Value Algorithm Source
Acriflavin resistance protein n=1 Tax=Thauera sp. 63 RepID=N6XI31_9RHOO similarity UNIREF
DB: UNIREF100
  • Identity: 69.0
  • Coverage: 116.0
  • Bit_score: 164
  • Evalue 1.00e-37
Multidrug transporter AcrB {ECO:0000313|EMBL:AIL13361.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.8
  • Coverage: 116.0
  • Bit_score: 211
  • Evalue 7.60e-52
cation/multidrug efflux pump protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family similarity KEGG
DB: KEGG
  • Identity: 69.0
  • Coverage: 116.0
  • Bit_score: 163
  • Evalue 4.10e-38

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 450
ATGAAATTGCCTGAACTTTGTATTCGGCGACCTGTCTTAACTCTTGTTTTAAACTTCTTAATCTTATTGGTAGGAAGTATTTCTTATACACGGCTTGCAGTTCGTGAATATCCAAATATAGATGAACCTGTTGTTACTGTTGACACGACCTATACAGGAGCGAGCGCTGAGATTATTGAAAGCCAAATCACCCAGCCACTCGAAGAAACTCTAGCTGGTATTGATGGTTTAAATACTTTAACGTCGATCAGTCGTCCAGAAGACAGCAAAATTACATTACGGTTTCGGATCACAAAAGATCCAGAAGCTGCAGCAAACGATGTGCGAGACAGAGTAAGCCGCTCCCGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCTTGCTTTTTCAAGTGATCGTTTTAGTCCTTTACAAATCTCTGATTATGCCGACCGCTATGTAA
PROTEIN sequence
Length: 150
MKLPELCIRRPVLTLVLNFLILLVGSISYTRLAVREYPNIDEPVVTVDTTYTGASAEIIESQITQPLEETLAGIDGLNTLTSISRPEDSKITLRFRITKDPEAAANDVRDRVSRSRXXXXXXXXXXXXILLFQVIVLVLYKSLIMPTAM*