ggKbase home page

SCNpilot_expt_500_bf_scaffold_6284_4

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_novel_39_47

near complete RP 46 / 55 MC: 1 BSCG 47 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: comp(5469..6821)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S1 n=1 Tax=uncultured bacterium RepID=K2DVD0_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 65.1
  • Coverage: 447.0
  • Bit_score: 599
  • Evalue 2.10e-168
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.1
  • Coverage: 447.0
  • Bit_score: 599
  • Evalue 3.00e-168
rpsA; 30S ribosomal protein S1; K02945 small subunit ribosomal protein S1 similarity KEGG
DB: KEGG
  • Identity: 68.5
  • Coverage: 413.0
  • Bit_score: 592
  • Evalue 1.40e-166

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 1353
ATGGGAATAGAACAACCTTTTATTATTCTAAAGATGGATCGTACGCGCGGTAATATTGTTGTTTCTCGTCGCGCTATTTTAGAAGAGACCAGAACTGAAGCAAGATCCGAACTTCTTTCCAACATGGAAGAAGGTAAAATTGTTGAAGGTACGGTAAAAAATATAACTGATTATGGTGCTTTTATTGATCTTGGTGGTATTGATGGATTACTCCATGTAACAGATATTTCATGGCGTCGTATCTCTCATCCGTCCGAAATGCTGCATGTAGGACAAAATGTGAAAGTCCAAATTATTCGCTACAATAAAGATACTCATCGTATCTCATTAGGAATGAAGCAACTTGAAAGCGATCCTTGGCAAAACATAGAAGCGAAGTTTCCGCTTCATGCAAAGCTTTCAGGAACAGTCACGAATATTGCTGATTATGGTGCGTTTGTTGAACTTGAGCCAGGAATTGAAGGTCTTGTCCATGTTTCAGAAATGAGCTGGATAAAGAAAAATGTTCACCCTTCAAAGCTTCTTTCCGTTGGACAAAACGTAGAAGTTATGGTTTTAGAAGTTGACTCCAATAAACGTAGAATAGCTCTTGGGATTAAACAATGCCAAGAAAATCCATGGGCAACTGTTGCAGAAAAATATCCTGTTGGTTCTGAATTCGAAAGCGAAATTCGCAACATCACGGAATTTGGTCTTTTTGTTGCAGTCTCAGGAGATCTTGATGGTATGGTTCATATGTCAGATCTTTCATGGTCAGAACCCTCTGATGAAGCAATTAAGAGCTACAAAAAAGGTGAAAAAATCACCGTCAAAGTACTTGAAGTTGACCCTGAAAAAGAGCGTATTTCTCTTGGTGTGAAACAACTTACAGCAGATCCTTTTGCTGAAGGTTTAGCGGCTTTAAAGCATAATGATATTGTCACTTGTGAAGTTACCGCTATCCAAGAAGCAGGCATTGAAGTTAAAATTGGCGAAGGTATAGAAGGGTTTATACGCAAAACTGATTTGTCCAAAGAACGCGCAGAACAACGTTCTGATCGCTTTGCTGTTGGAGAAAAGGTTGATGCAAAAATCATTAATATTGATCGTTCTACGCGACGTATTAGCCTATCCATCAAAGGACGCGAAATTGCTGAAGAGAAAGAGGCGATGGCGACTTATGGTTCAGCAGACAGCGGTGCAAGTTTAGGAGATATTCTCGGAGCTGCTTTTGATAAGGTAAAAGATAAATCAAAAGAAGAAAAACCGAAAGAAAAGAAAGTTTCTAAAACCGCATCAAACGCAAGCGAAGAAAAGCCTGCAAAAACTTCTAAGAAGAAAACAGCAGATACAAATATTGCTGATACTGAATAA
PROTEIN sequence
Length: 451
MGIEQPFIILKMDRTRGNIVVSRRAILEETRTEARSELLSNMEEGKIVEGTVKNITDYGAFIDLGGIDGLLHVTDISWRRISHPSEMLHVGQNVKVQIIRYNKDTHRISLGMKQLESDPWQNIEAKFPLHAKLSGTVTNIADYGAFVELEPGIEGLVHVSEMSWIKKNVHPSKLLSVGQNVEVMVLEVDSNKRRIALGIKQCQENPWATVAEKYPVGSEFESEIRNITEFGLFVAVSGDLDGMVHMSDLSWSEPSDEAIKSYKKGEKITVKVLEVDPEKERISLGVKQLTADPFAEGLAALKHNDIVTCEVTAIQEAGIEVKIGEGIEGFIRKTDLSKERAEQRSDRFAVGEKVDAKIINIDRSTRRISLSIKGREIAEEKEAMATYGSADSGASLGDILGAAFDKVKDKSKEEKPKEKKVSKTASNASEEKPAKTSKKKTADTNIADTE*