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SCNpilot_expt_500_bf_scaffold_1582_1

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_67_36

partial RP 33 / 55 BSCG 33 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 3..1895

Top 3 Functional Annotations

Value Algorithm Source
Hopanoid biosynthesis associated RND transporter like protein HpnN n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z7I0_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 73.6
  • Coverage: 626.0
  • Bit_score: 893
  • Evalue 1.30e-256
Hopanoid-associated RND transporter, hpnN {ECO:0000313|EMBL:GAO55501.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.6
  • Coverage: 624.0
  • Bit_score: 951
  • Evalue 7.40e-274
hopanoid biosynthesis associated RND transporter-like protein HpnN similarity KEGG
DB: KEGG
  • Identity: 63.8
  • Coverage: 624.0
  • Bit_score: 748
  • Evalue 1.60e-213

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1893
GTGCGGCAGGCGGCCGGCGCGCTCGGGCTAGACGCCGCGCATGGCGTCCGCGTGCAGCTCACCGGCGAAGTGCCGCTCGCCGACGAGGAATTCGCCACCTTGCAGGAGAATATCGGCCTCGTCGGCGCGATCATGCTTGGGGCGATGCTGATAACGCTCTGGCTGGCGACGCGCTCGGCGCGGCTGGTCGCGGCGATCCTCGCCACCATCCTGCTCGGCCTCGTCATCACCATGGCGATCGGGCTGCTCGCGGTGGGGCGGTTCAACCTGATCTCGATCGCGTTCATCCCGCTGTTCGTCGGACTGGGCGTGGATTTCGGCATCCAGATCTGCGTCCGCTACAATGCCGAGCGCGCGAGCGGCGCGGCGCCCGATGCGGCGCTGCGCCAGGCCGCCGCCGTGCTCGGCGCGCCACTGACGCTGGCGGCGGGGGCGATCTTCCTCGGCTTCGGCGCGTTCCTGCCGACCGAATATATCGGCATCGCCGAGCTGGGCGTGATCGCCGGGCTGGGCATGGTTGTCGCGCTGGCGCTGAGCGTGACATTGCTGCCCGCGCTGGTGATCGTGTTCCGGCCGGGCGCGCCGCGCGGCGAGACGGGCTTTGCGCGGCTCGCGCCGATCGATCGTCTGCTGGAGCGACGGCGCGGCGCGGTGCTGTGGACGTTCGTGGCGGCGCTGGCCGCGAGCATCGCGCTGCTGCCGTGGGTGGTGTTCGATTTCAACCCGCTCCACCTGCGCGATCCCCATGCCCCCGCGATGCGCGCGCTGGCCGAGCTGACCCGCGATCCCGACCGCACGCCCAACACGATCGACGTGCTTGCCGCCAACCGCGCCGACGCAGCGACGCTGGCCGCGCGGCTCGCGAAGTTGCCGGAGGTGTCGCACGTCGTCTCGCTCGACAGCTTCGTGCCGGAGGATCAGCCGCCCAAGCTCGCGCTGATCCAGGATGCGGCGCTGCTGCTCGATGTGACGATCAACCCGCTCGACGTCGCGCCGCCGCCCGCCGATGCCGATCTCGTCGCGTCGCTGGGCCAAAGCGCGGTGAAGCTGCGCGCCGCGGCGAAGGGCGATGCGGCGGGGCAAGACATGCTGCGCCTCGCCGATGCGTTCGACCGGCTGGCGCGCGCGTCCGCCGCGAAACGCGCCGCGGTCAACGCGCTGCTCGTCCGCCCGCTCGGCGTGATGCTCGATCAGATGCGCCTCGCGCTTCAGGCGTCCCCTGTCACCCGCGCCGACCTGCCGCCCGATCTGGTGCGGGACTGGGCCGCGCCGGACGGGCGGATGCGGTTGCAGGTCTTTCCCGCCGGTAACAGCAACGACAACACGGTAATCCGCCGCTTCCGCGCGGCGGTGGCGGGCGTGACCCCGGCGATCTCCGGCCTGCCGGTCGCGACCCAGGCGGCGGCGGGCACGGTGGCGGGCGCGTTCGTCAAGGCCGGGATCATCGCCTTCCTGCTGGTCAGCGCCCTGCTGTTCGCGGTGCTGCGCGATCTGCGCGAGGTGGCCTTCACGCTCGCGCCGGTGGTGCTGTCGATCTTCCTCACGCTCGGAAGCTGCGTGCTGATCGGCCAGCCGATCAACTTCGCCAACATCATCGCCTTCCCGCTGCTGTTCGGGGTGGGCGTCGCCTTCCATATCTATTTCGTGATGGCGTGGCGGGCGGGAGCGACCGGGCTGCTGCAATCGAGCCTAGCGCGCGCCGTGCTGTTCAGCGCGCTTGCGACCGGCACGGCGTTCGGCAGCCTGTGGCTGTCGCGCCATCCGGGCACCGCCAGCATGGGTGAGATATTGATGATCTCCTTGGTCTGGACGCTGATCTGCGCCTTGATCTTCGAGCCGGCGCTGCTCGGCCCGCCCGAGCGGAAGCGGCACAATGAACCCGCACCACGCTGA
PROTEIN sequence
Length: 631
VRQAAGALGLDAAHGVRVQLTGEVPLADEEFATLQENIGLVGAIMLGAMLITLWLATRSARLVAAILATILLGLVITMAIGLLAVGRFNLISIAFIPLFVGLGVDFGIQICVRYNAERASGAAPDAALRQAAAVLGAPLTLAAGAIFLGFGAFLPTEYIGIAELGVIAGLGMVVALALSVTLLPALVIVFRPGAPRGETGFARLAPIDRLLERRRGAVLWTFVAALAASIALLPWVVFDFNPLHLRDPHAPAMRALAELTRDPDRTPNTIDVLAANRADAATLAARLAKLPEVSHVVSLDSFVPEDQPPKLALIQDAALLLDVTINPLDVAPPPADADLVASLGQSAVKLRAAAKGDAAGQDMLRLADAFDRLARASAAKRAAVNALLVRPLGVMLDQMRLALQASPVTRADLPPDLVRDWAAPDGRMRLQVFPAGNSNDNTVIRRFRAAVAGVTPAISGLPVATQAAAGTVAGAFVKAGIIAFLLVSALLFAVLRDLREVAFTLAPVVLSIFLTLGSCVLIGQPINFANIIAFPLLFGVGVAFHIYFVMAWRAGATGLLQSSLARAVLFSALATGTAFGSLWLSRHPGTASMGEILMISLVWTLICALIFEPALLGPPERKRHNEPAPR*