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SCNpilot_expt_500_bf_scaffold_1958_13

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_67_36

partial RP 33 / 55 BSCG 33 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 9130..9714

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B62B29 similarity UNIREF
DB: UNIREF100
  • Identity: 67.4
  • Coverage: 193.0
  • Bit_score: 265
  • Evalue 5.40e-68
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 42.3
  • Coverage: 189.0
  • Bit_score: 173
  • Evalue 8.80e-41
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 62.7
  • Coverage: 193.0
  • Bit_score: 250
  • Evalue 2.50e-63

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Taxonomy

R_Sphingopyxis_65_24 → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 585
ATGACCGCGTTGCTCGACGCGACCGCCGAAATCCTTTCCGAAGCCACGCGGATCGAAGCCTCACTCAGTGAGATCTCCAAGCGCTCGGGCGTCAACAGCGCGATGGTCAAATATTATTTCGGCGACAAGGAAGGCCTGTTCCTGGCACTGCTCGATCGCGACGCCGAAGCCGCGATGCGCGCCTTATCCGAACTGGTCGCGATGGACATGCCCGCCGCACGCAAGCTGCAGATCCACATCCAGGGGATCATTAACAGCTACCAGCGCTCGCCCTATCTCAACAGGCTGATCCATTATGTCAGCGAATCCGCCAATCCGGAGATCAGCGCGCGGATCGCCAGGGCCTTTATCCGGCCGATGATGGAGGCATATCGCTCGATCATCGCGCAGGGCGTGGCGGAAGGGACGCTACAAGACGTCGATCCCGGCCTGCTCTATTACGCACTGGTCGGCGCCGCGGACCACATGTTCTTCGCCAGCTATTCCGTGCAGACCACGCTCGGCGTCCGGGAAATCACGCCTGCCATCAAGCAACGCTTCATCGATCTGATGTCGACCGTGTTCCTCAAGGGCCTGACGCCCTGA
PROTEIN sequence
Length: 195
MTALLDATAEILSEATRIEASLSEISKRSGVNSAMVKYYFGDKEGLFLALLDRDAEAAMRALSELVAMDMPAARKLQIHIQGIINSYQRSPYLNRLIHYVSESANPEISARIARAFIRPMMEAYRSIIAQGVAEGTLQDVDPGLLYYALVGAADHMFFASYSVQTTLGVREITPAIKQRFIDLMSTVFLKGLTP*