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SCNpilot_expt_500_bf_scaffold_1815_6

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_67_36

partial RP 33 / 55 BSCG 33 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 3924..4553

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037BFD4C similarity UNIREF
DB: UNIREF100
  • Identity: 76.1
  • Coverage: 180.0
  • Bit_score: 275
  • Evalue 5.60e-71
RNA polymerase sigma70 {ECO:0000313|EMBL:AJP73515.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.9
  • Coverage: 180.0
  • Bit_score: 248
  • Evalue 6.00e-63
RNA polymerase sigma 28 subunit FliA/WhiG similarity KEGG
DB: KEGG
  • Identity: 51.7
  • Coverage: 178.0
  • Bit_score: 164
  • Evalue 3.40e-38

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 630
ATGCGCTGGTCCACGAGCATCTGCCGCTTGTCCGGCGGCTGGCGTGGCATGTCCACGGCAGCGTCTCGACGGCGGTGGAGGGGGGGGACAGCCGCCGCGTTCGAGGATCGCGGGCAGGTGACGTTCCGGCAATATCTCACGACGCGGCTACGCGGCGCGATGATCGACGAACTGCGCCGCCACGCCGCGATGACGCGCGGCGCGATCCGCCGCCGCCGCGACTATCAGCGCGTGACCGGGCAGCTCGCGGGCGAGCTTGGCCGCGCCCCGACCGACGGCGAGACGGCCGCGCGGCTGGGCGTGACGGTGGAGAAGCTCCGCGCCGAATATGCCACCGCCGAGGCGGTGCGCTTCGATCCGATCGACGAGGTCTATGCCGACGACCAGCCCTGGTTCGCCAGCGACGAGCCGAGCGCATTCGACCAACTCGCCGAAGGCGAGGTGCGCGACCTGCTGACCGACGCGGTCGCCGCGCTGCCCGAGCGGGAGCGGCTGGTGATCCACCTCTATCACGTCGAGGAACTGAACCTCGAGGAGATCGGGCAGGTGCTGGGCGTCGGCGCCGCGCGCGTGTGCCAGATCAAGGCCGCCGCGCACGCGAGACTGAAGAAGGCCCTGACGCCGCGCTAA
PROTEIN sequence
Length: 210
MRWSTSICRLSGGWRGMSTAASRRRWRGGTAAAFEDRGQVTFRQYLTTRLRGAMIDELRRHAAMTRGAIRRRRDYQRVTGQLAGELGRAPTDGETAARLGVTVEKLRAEYATAEAVRFDPIDEVYADDQPWFASDEPSAFDQLAEGEVRDLLTDAVAALPERERLVIHLYHVEELNLEEIGQVLGVGAARVCQIKAAAHARLKKALTPR*