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SCNpilot_expt_500_bf_scaffold_1815_8

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_67_36

partial RP 33 / 55 BSCG 33 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 6089..7000

Top 3 Functional Annotations

Value Algorithm Source
Fis family transcriptional regulator n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B55D15 similarity UNIREF
DB: UNIREF100
  • Identity: 84.0
  • Coverage: 307.0
  • Bit_score: 509
  • Evalue 2.00e-141
Sigma-54 interaction domain protein {ECO:0000313|EMBL:EZP50944.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.9
  • Coverage: 319.0
  • Bit_score: 497
  • Evalue 1.80e-137
two component system, response regulator FlrC; K10943 two component system, response regulator FlrC similarity KEGG
DB: KEGG
  • Identity: 65.2
  • Coverage: 313.0
  • Bit_score: 381
  • Evalue 3.30e-103

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Taxonomy

Sphingomonas sp. RIT328 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 912
GTGGCGGAGGCCGACATCACCGTGCTCGTCAACGGCCCCACCGGCACCGGCAAGGAAGTGCTGGCGCGGACGATCCACATGAATTCCGCGCGCCGCGACGGCCCGTTCGTCGCGATCAACTGCGCCGCCCTCCCGGAGACGATGCTGGAGGCGATGCTGTTCGGCCACCAGAAGGGCGCGTTCACCGGCGCCTCCTCCGGCGGCGAGGGCTTCTTCCGCGCGGCGGAGGGCGGGACGATCCTGCTCGACGAGATCGCGGAGATGCCACTCGCGCTGCAGGCCAAGCTGCTGCGCGTGCTGCAGGAGCGCGAGGTGGTGCCGATCGGCGCGACCCAGCCGATTCCGGTCGACGTGCGCGTCATCGCCTGCGCCAACCGCGATCTCCAGACCGAGGTGGCGGAAGGCCGCTTCCGCGCCGACCTCTATTATCGCCTGTCGGTCTTCCCGCTCGCCACCAAGGCGCTGGCGGAGCGGCCGCAGGACATCCCGGCGCTCGCCGCGACGATGATCCTGCGCCACGCCGGCAACCGCGCGATCGTGCCCTGGCCGTCGGCCGAGGTGATCGACACCCTTGCCGCGCACGACTGGCCGGGCAACGTGCGCGAGCTGGAGAATGTGATCCAGCGCGCCCTGCTCTTCGCCGCCGGCGACACGATCGAGGCCGGGCATATCGTGTTCGACCGCCCCGCCGCCCCGATGCGCGCCGCCAATGAGGCGGCGACCCTGGGCAAGGTGGTGCAGCTTTCCGAATTCGCCGCGATCCGCGAGACACTGAAGGCGTGCAACGGCAGCCGGATCGAGACCGCGCGGCGGCTCGGCATCTCCGAGCGCACGTTGCGCTACCGTCTCGCCAAGGCGCGCGAACAGGGCGAGGACATCGCCGCGCCGCATAGCAGGGTGGCGTCGGCATGA
PROTEIN sequence
Length: 304
VAEADITVLVNGPTGTGKEVLARTIHMNSARRDGPFVAINCAALPETMLEAMLFGHQKGAFTGASSGGEGFFRAAEGGTILLDEIAEMPLALQAKLLRVLQEREVVPIGATQPIPVDVRVIACANRDLQTEVAEGRFRADLYYRLSVFPLATKALAERPQDIPALAATMILRHAGNRAIVPWPSAEVIDTLAAHDWPGNVRELENVIQRALLFAAGDTIEAGHIVFDRPAAPMRAANEAATLGKVVQLSEFAAIRETLKACNGSRIETARRLGISERTLRYRLAKAREQGEDIAAPHSRVASA*