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SCNpilot_expt_500_bf_scaffold_2088_9

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_67_36

partial RP 33 / 55 BSCG 33 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(4412..4975)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00035DC5A0 similarity UNIREF
DB: UNIREF100
  • Identity: 61.8
  • Coverage: 178.0
  • Bit_score: 210
  • Evalue 1.20e-51
Cold-shock protein {ECO:0000313|EMBL:AIT06538.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.3
  • Coverage: 194.0
  • Bit_score: 226
  • Evalue 3.80e-56
cold-shock DNA-binding protein family protein similarity KEGG
DB: KEGG
  • Identity: 51.3
  • Coverage: 195.0
  • Bit_score: 203
  • Evalue 7.60e-50

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Taxonomy

Sphingomonas taxi → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 564
ATGTCTCGCGATGCGGATGACCGCGAACAGGAAGAGGGTGTGCCCGGCGCCGAGGAAGGCGTGCGGGTGGCCGGTACGCTCAAATGGTTCGACGTCACGCGCGGTTTCGGTTTCCTCGTGCCCGATACTGGCGACACGGGGGATGTGCTGATCCATTTCAGCGTGCTCCAGCCGCTCGGCCGGCGCAGCCTGCCGGAGCGTTCCCGCGTGGAGGCGATCGCGGTGAAGCGCGAGCGCGGTTTCCAGGCGGTGGAGATATTGTCGGTCGATACCTCGCAGGCCGTTGAACAGGGGGCGCCGCGCGACCGCGCGCGCATCGATCCCGCCAGCATGATCGACGAGGCGGGCGACTGGGAACCGGTGCTGGTGAAATGGTTCAACCGGCTGAAGGGCTATGGTTTCCTGGTGCGGCCGGCCGGGGACCAGGATATATTCGTCCATATGGAAACGCTGCGCCGCGCCGCGATCCATGAGGTGGAGCCCGACCAGCCGCTGCGCGCGCGCGTGGTGGAGGGGCGCAAGGGCCCGCTCGCGGTGGTGGTCGATATCGCGCCGGAGGAATGA
PROTEIN sequence
Length: 188
MSRDADDREQEEGVPGAEEGVRVAGTLKWFDVTRGFGFLVPDTGDTGDVLIHFSVLQPLGRRSLPERSRVEAIAVKRERGFQAVEILSVDTSQAVEQGAPRDRARIDPASMIDEAGDWEPVLVKWFNRLKGYGFLVRPAGDQDIFVHMETLRRAAIHEVEPDQPLRARVVEGRKGPLAVVVDIAPEE*