ggKbase home page

SCNpilot_expt_500_bf_scaffold_2544_15

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_67_36

partial RP 33 / 55 BSCG 33 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 13442..14623

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPL3_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 59.5
  • Coverage: 373.0
  • Bit_score: 450
  • Evalue 1.80e-123
TonB-dependent receptor {ECO:0000313|EMBL:ENY80390.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.5
  • Coverage: 373.0
  • Bit_score: 450
  • Evalue 2.60e-123
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 44.8
  • Coverage: 368.0
  • Bit_score: 320
  • Evalue 9.00e-85

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1182
ATGTCCCGTAGTTTCAACCGTCTGTTGATTGGAATTGCCGCAACGCCGCTCGTCGTCGCGCTGGGAGCGGCTTCCCCCGCCGCCGCGCAATCCGCCCCCGATTCGACCCCCGCCGCCGCCCCCCAGAGCAGCGAGAGCGCCGGCGGCGATATCGTCGTCACCGCGCAGAAGCGCGAGCAGCGGCTGCAGGACGTGCCGATCTCGATGGAGGTCGTCAGCGGGCAGAAGGTCGCCGATTTCTCCGCCGCCGATTTCAAGGCGGTGCAGAATTACGTGCCGAACATGTTCGTGCAACAGACCAACGGCAACGACACGATCTACATCCGCGGCTTCGGCTCGCCGCCCCAGAACTTCTCGTTCGACCAGGCGGTCAGCGTCTATATGGACGGCGTCTATGCCGGCAAGATGCGCCAGGCGCTCAACCCGTTCTTCGACGTCGCGCGCGTCGAGGTGATGCGCGGGCCGCAGGGCGCGCTGTACGGCAAGAACACCCCGGCGGGCGCGATCAGCGTGGTCAGCGCCGGCCCGACCCAGACGTTCGAGGGCGCTGTCACCGGCACCTATAATTTCGATCTCAAGGGCTACGACCTGACCGGCTATGTCTCCGGCCCGGTCACCGACACGCTCTCGCTGCGCGTCGCGACCCGCATCCAGGATCAGGACGGCTATATCAAGAACCTCGCCACCGGGCATGAGGATCCGGAGAACAAGCTGCAGCTGTTCCGCATCAGCGCCTTGTGGCAGCCGAGCGACAATTTCGACCTGTCCGCCAAGCTGGAGATGTCGAATTACGAGCGCGTCGGCGGCCTCGGCGTATCCAGCCCGGTCAATACCGCGCAGCAGCCGAAGCTGACCCGCTACGCGGTCAACACGCCGCTCGGTCAGGAGGGCTATACCAACCGCTCGATCCTCGGCTCGGTCACCGCGAACCTCAAGGTCGGCACGCATACGCTGACCTCGATCACCGGCTATTCGTGGTTCGACGGGCAGGTGACGAACTATTTCGATCAGCAGGCGCCAAGCGGCGCGATCGTGGAAAATTCGGTTTACAATAAGTACCCGGAAAACTTCAAACAATTCTCGCAGGAAGTGCGCCTGCTCTCGCCCACCGGCGGGTGGACCCGTATCTTGGATACGACTTCCCGATCAGCGCCTATTTCCCGTCCGGTCTCTACTCGATGA
PROTEIN sequence
Length: 394
MSRSFNRLLIGIAATPLVVALGAASPAAAQSAPDSTPAAAPQSSESAGGDIVVTAQKREQRLQDVPISMEVVSGQKVADFSAADFKAVQNYVPNMFVQQTNGNDTIYIRGFGSPPQNFSFDQAVSVYMDGVYAGKMRQALNPFFDVARVEVMRGPQGALYGKNTPAGAISVVSAGPTQTFEGAVTGTYNFDLKGYDLTGYVSGPVTDTLSLRVATRIQDQDGYIKNLATGHEDPENKLQLFRISALWQPSDNFDLSAKLEMSNYERVGGLGVSSPVNTAQQPKLTRYAVNTPLGQEGYTNRSILGSVTANLKVGTHTLTSITGYSWFDGQVTNYFDQQAPSGAIVENSVYNKYPENFKQFSQEVRLLSPTGGWTRILDTTSRSAPISRPVSTR*