ggKbase home page

SCNpilot_expt_500_bf_scaffold_2711_2

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_67_36

partial RP 33 / 55 BSCG 33 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(1736..2368)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Blastomonas sp. AAP53 RepID=UPI00036819A7 similarity UNIREF
DB: UNIREF100
  • Identity: 45.3
  • Coverage: 203.0
  • Bit_score: 160
  • Evalue 2.60e-36
Transcriptional regulator, TetR family {ECO:0000313|EMBL:KGB53086.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.4
  • Coverage: 211.0
  • Bit_score: 255
  • Evalue 6.50e-65
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 43.5
  • Coverage: 193.0
  • Bit_score: 136
  • Evalue 7.50e-30

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis sp. LC81 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 633
ATGACGGAAGTTCGACGCCGGCGGACACAAGCGGAGCGAAGCGCGGGAACGCGCGCCGCCCTGCTCGATGCCGCGATACGCATGTTGCGCGAGCACGGTTACGGCGCGACCACCACGATGCTGGTCGCGGCGGAGGCCGGGGTCAGCCGCGGCGCGATGCTGCACCAGTTCCGCACCAAGGCCGATCTGATGACCTTCGTGGTCGAGGCGGTCTATGAGGAGGAGCTGGAGCGCTACGCGGAGCATTTCCGCGGGATGAAGGACACGCGCCGGATCGTCCGGGCCTATCCCGAAGTGGTGTGGGAGGTGCTGAGCCGCCCGTCCGGCGTCGCGGTGCTCGAAATCCTGCAGGGATCGCGCAGCGATCACGTCCTTGCCGAGAAGCTGGCGCCGATCCAGGCGCGGATCGAGGAGGATGCGCTCCGCCACGTCCGCGAGACGACCGGTGTGGCGGATACGTCGATGGCGATGATGCGGCTGATCGTCTGGGCGGTGCGCGGGCTGTCGATCGCCAGCGTGCTCACGCCGCGACCGGAGGAGGTGGCCGCGTCGGTCCGCCTGCTCAGCCGATTGGTCGATGCGGGGTTCGAGACCGGCGTGCTGCGCCTTGATGGCACCGGGGCCGCGCAATGA
PROTEIN sequence
Length: 211
MTEVRRRRTQAERSAGTRAALLDAAIRMLREHGYGATTTMLVAAEAGVSRGAMLHQFRTKADLMTFVVEAVYEEELERYAEHFRGMKDTRRIVRAYPEVVWEVLSRPSGVAVLEILQGSRSDHVLAEKLAPIQARIEEDALRHVRETTGVADTSMAMMRLIVWAVRGLSIASVLTPRPEEVAASVRLLSRLVDAGFETGVLRLDGTGAAQ*