ggKbase home page

SCNpilot_expt_500_bf_scaffold_3353_2

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_67_36

partial RP 33 / 55 BSCG 33 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 640..1068

Top 3 Functional Annotations

Value Algorithm Source
nitrogen-fixing protein NifU n=1 Tax=Sphingomonas echinoides RepID=UPI00026CAB52 similarity UNIREF
DB: UNIREF100
  • Identity: 68.1
  • Coverage: 138.0
  • Bit_score: 193
  • Evalue 1.50e-46
Nitrogen-fixing protein NifU {ECO:0000313|EMBL:KHA64746.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.4
  • Coverage: 144.0
  • Bit_score: 200
  • Evalue 1.30e-48
NifU-like protein similarity KEGG
DB: KEGG
  • Identity: 66.2
  • Coverage: 139.0
  • Bit_score: 175
  • Evalue 1.30e-41

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas sp. Ant20 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 429
ATGAACGCGCCGCTCTACAACGAACGCATATTGCGGCTGACCACCGAAGTGCCGGATCGCCGGCTGACCGCGCCGATGGCGACGAGCGAGAAGCGCTCGCCGGTCTGCGGCAGCCGGGTGACGGTGGAGGTGAACCTCGACGCGAACGGCCGGGTGGGCGAGATCGGGATGCTGGTCAGCGCCTGCGCGCTCGGCCAGGCCTCGTCCGCGCTGCTCGCGGCGCATGTCGCCGGGCGCACGCCGGGCGAGCTTGCCGCCGCGCGCGACGCGTTGGCCGCGTGGCTCGCGGGGGAGGGCGCGATGCCCGACTGGCCCGGTCTCGACGTCTTCGTCCCGGCGCTGTCCCACACCGCGCGCCACCCCGCGATCCGCCTCGCGTTCGAGGCGGCGGCGGAAGCGGCCGCGCAGGCTCGGGGCGCGGGCGGATGA
PROTEIN sequence
Length: 143
MNAPLYNERILRLTTEVPDRRLTAPMATSEKRSPVCGSRVTVEVNLDANGRVGEIGMLVSACALGQASSALLAAHVAGRTPGELAAARDALAAWLAGEGAMPDWPGLDVFVPALSHTARHPAIRLAFEAAAEAAAQARGAGG*