ggKbase home page

SCNpilot_expt_500_bf_scaffold_3353_6

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_67_36

partial RP 33 / 55 BSCG 33 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(4606..5187)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.7
  • Coverage: 180.0
  • Bit_score: 253
  • Evalue 1.70e-64
shikimate kinase; K00891 shikimate kinase [EC:2.7.1.71] similarity KEGG
DB: KEGG
  • Identity: 65.4
  • Coverage: 182.0
  • Bit_score: 233
  • Evalue 4.20e-59
shikimate kinase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B5DE5D similarity UNIREF
DB: UNIREF100
  • Identity: 74.3
  • Coverage: 187.0
  • Bit_score: 272
  • Evalue 4.40e-70

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas parapaucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 582
ATGGCCTCTACGTCGCTGCGCTGTATAGCCGCGCTGACGATGTTGCAAAGCCCCGCCCCGCCCCAGGCCGTCTGGACCGGCCAGCCGATCGTGCTGGTGGGGCTGATGGGCGCGGGCAAATCCACCGTCGGGCGACGGCTGGCGCTGCGGCTTCGCCTGCCCTTCGTCGATGCCGATACGGAGATCGAGCAGGCGGCGGGGATGACCATTGCGGAGATGTTCGCGCAATATGGCGAGCAATATTTCCGCGATGGCGAGCGCCGGGTGATCGCGCGGCTGATGGACGGCGCGCCGAAGGTGATCGCAACCGGCGGCGGCGCATTCGTCAACGAGGAGACGCGCGCGCTGATCCTGGCGGAGGCGCTGGCGGTGTGGCTCGACGCCTCGATCGAGGTGCTGGCGGAGCGGGTGCGCAAGCGCGGCCACCGCCCGCTGCTGGTCGGCAAGGATCCCGCGCAGGTGCTGCGCGAGCTGGCGGAGGTGCGCAACCCGCTCTACGCGCAGGCGCAGGTCCGCGTGCCGAGCAACAACGTGCCGCATGACTTTACCGTCCGGGCGATATTGGAGGCGATCGGCAAGTGA
PROTEIN sequence
Length: 194
MASTSLRCIAALTMLQSPAPPQAVWTGQPIVLVGLMGAGKSTVGRRLALRLRLPFVDADTEIEQAAGMTIAEMFAQYGEQYFRDGERRVIARLMDGAPKVIATGGGAFVNEETRALILAEALAVWLDASIEVLAERVRKRGHRPLLVGKDPAQVLRELAEVRNPLYAQAQVRVPSNNVPHDFTVRAILEAIGK*