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SCNpilot_expt_500_bf_scaffold_3979_12

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_67_36

partial RP 33 / 55 BSCG 33 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 8249..9187

Top 3 Functional Annotations

Value Algorithm Source
ocd; ornithine cyclodeaminase; K01750 ornithine cyclodeaminase [EC:4.3.1.12] similarity KEGG
DB: KEGG
  • Identity: 76.2
  • Coverage: 307.0
  • Bit_score: 452
  • Evalue 1.20e-124
  • rbh
Ornithine cyclodeaminase {ECO:0000313|EMBL:BAK65068.1}; EC=4.3.1.12 {ECO:0000313|EMBL:BAK65068.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.2
  • Coverage: 307.0
  • Bit_score: 452
  • Evalue 5.40e-124
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00036C7048 similarity UNIREF
DB: UNIREF100
  • Identity: 80.4
  • Coverage: 311.0
  • Bit_score: 496
  • Evalue 2.30e-137
  • rbh

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Taxonomy

Sphingobium sp. SYK-6 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 939
ATGATCGTGATCGGCGCCGAGGAGGTCGCGCGCAGGCTCGACCGTCCGGCATGCATCGCGCTGATGCGCGAGGCGATGATGGCGCTGTCGGGCGGGCGCTCGAAGCAGTTGCTGCGCGGGATCATCGATCTCGGTGGTGGCGATGCGTTCGGCGTGATGCCGGGCGCGCTCGACGGCGCGGGATTCGGCGCGAAGCTGGTGAGCGTGTTTCCCGCCGCCGCGGCGAACGGGCGCTCGCATCAGGGCGCGATCCTGCTGTTCGATCGCGGGAGCGGCGCGCCGGTGTGCGTCGTCGATGCCGGCGAGGTGACGGCGATCCGCACCGCCTGCGCCTCCGCCGCCGCGACCGACGCGCTGGCGCGCGCCGACGCGACGCGGCTCGCGATCCTCGGCACCGGCGAGCAGGCGTGGCAGCATGCGCTGGCGATCCGCCATGTCCGCCCGCTGGAGCGCATCGCGATCTGGGGCCGCGACATGGAGAAAGCGGCGGGCCTTGCCGGGCGGATCGCCGACGCGCTCGCTTTGCCGGTCGAGGTCGCGCGGACCCCGGCCGAGGCGGTGCGCGATGCCGATATCGTCTGCACCACCACGGCGGCGGCGGAGCCGATTCTGTTCGACGGCGATATCGCCCCCGGCACGCATCTCAACGTCGTGGGATCGAGCCGCGCCGGGCCGGTGGAGATCGACGACGCGCTGGTCCGCCGCGCGCGATTCTTCCCCGATCACCGCGAGGGCGTGCTGGCGCAGGGCGCGGAATTCCTGCGCGCCAAGGCGGCCGGGCTGGTCGATGACGATCACGTCCTTGCCGAGATCGGCGCGGTCTATGCCGGCACCGCGCCGGGCCGGCGCGACGCGCGGGAAGTGACGATCTACAAGTCGCTCGGCTCGATCGTGCAGGACCTCGCCTGCGCCGCCTGGCTCCATCGCACGGCGGCATAG
PROTEIN sequence
Length: 313
MIVIGAEEVARRLDRPACIALMREAMMALSGGRSKQLLRGIIDLGGGDAFGVMPGALDGAGFGAKLVSVFPAAAANGRSHQGAILLFDRGSGAPVCVVDAGEVTAIRTACASAAATDALARADATRLAILGTGEQAWQHALAIRHVRPLERIAIWGRDMEKAAGLAGRIADALALPVEVARTPAEAVRDADIVCTTTAAAEPILFDGDIAPGTHLNVVGSSRAGPVEIDDALVRRARFFPDHREGVLAQGAEFLRAKAAGLVDDDHVLAEIGAVYAGTAPGRRDAREVTIYKSLGSIVQDLACAAWLHRTAA*