ggKbase home page

SCNpilot_expt_500_bf_scaffold_5113_16

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_67_36

partial RP 33 / 55 BSCG 33 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 11226..12113

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036F1540 similarity UNIREF
DB: UNIREF100
  • Identity: 78.3
  • Coverage: 295.0
  • Bit_score: 459
  • Evalue 2.30e-126
  • rbh
Putative LysR family transcriptional regulator {ECO:0000313|EMBL:GAM00272.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.6
  • Coverage: 295.0
  • Bit_score: 455
  • Evalue 6.00e-125
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 57.8
  • Coverage: 294.0
  • Bit_score: 336
  • Evalue 7.00e-90
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas parapaucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 888
ATGCGGCTACCCGATCTTGAGGCCTGGGCGACCTTCGCCACCGTGGCGGACCATAGCTCGTTCAGCGCCGCCGCCGCCGCGATGGGCGTGTCCAAGGCGACGGTGTCCAAGACGGTCGCGCGGCTGGAGGCGTCGCTCGGCCAGTCGCTGTTCCACCGCACCTCGCGCCGGCTGACGCTGACGGAAGCGGGCAAGCCGCTCGCCGAGCGCGCGCGGCGGATGCTGGCGGAGGCGGTGGCGGCGGAGGAAGCCGCGCACGACGCCGCCTCGGCGCCGGCCGGGCGGGTGCGGCTCGCCGCGCCGATGACGTTCGGCGTCACCAACGTCGCGCCGCTGATCGCGGCATTCCTCGGCGAGCATCCGGGGATAGAGATCGAGCTGGCGCTGTCCGACGCGCGAGTCGACATCGTCGCGGAGGGGTTCGACGTGGCGCTGCGCATCGCCGACCTGCCGGACAGTTCGCTGCGCGCGCGGCGGCTGTGCAGCATCACCAGCCGCATCGTCGCCGCGCCGGCCTATCTGGAGCGGCATGGCACCCCGCGCCATCCGGGCGAGCTGGGCGCGCATCGGCTGCTCGGCTATACCAACGTCACCGGCCCGTGGCGCTTTCGCGGGCCGGGCGGCGCGGAGGTGGCGGTGCGCGCGGAGGGGCCACTCGCCGCCAACAGCGGCGACGCGCTGATGCCCGCGCTGATCGCCGGGATCGGCATCGCGCGGCTGCCCGATTTCATCCTCGGCGACACGGTGGCGGACGGGCGGCTGGTGGAGATCCTGCCCGAATGGCGGCCCGCGCCGGTCGGCCTGCACCTGCTCACCCCGCCCAGCCCCTTGCGCCCGGCACGGGTGGAGGCGCTGATCGCCTTCCTTTCCGAACGGCTGCGCGATTGA
PROTEIN sequence
Length: 296
MRLPDLEAWATFATVADHSSFSAAAAAMGVSKATVSKTVARLEASLGQSLFHRTSRRLTLTEAGKPLAERARRMLAEAVAAEEAAHDAASAPAGRVRLAAPMTFGVTNVAPLIAAFLGEHPGIEIELALSDARVDIVAEGFDVALRIADLPDSSLRARRLCSITSRIVAAPAYLERHGTPRHPGELGAHRLLGYTNVTGPWRFRGPGGAEVAVRAEGPLAANSGDALMPALIAGIGIARLPDFILGDTVADGRLVEILPEWRPAPVGLHLLTPPSPLRPARVEALIAFLSERLRD*