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SCNpilot_expt_500_bf_scaffold_5202_30

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_67_36

partial RP 33 / 55 BSCG 33 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 28849..29640

Top 3 Functional Annotations

Value Algorithm Source
LacI family transcription regulator n=1 Tax=Sphingomonas echinoides RepID=UPI00026C9C4F similarity UNIREF
DB: UNIREF100
  • Identity: 62.9
  • Coverage: 264.0
  • Bit_score: 315
  • Evalue 4.70e-83
  • rbh
Transcriptional regulator of maltose utilization of lacI family {ECO:0000313|EMBL:GAO56471.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.1
  • Coverage: 265.0
  • Bit_score: 294
  • Evalue 1.20e-76
periplasmic-binding protein/LacI transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 36.8
  • Coverage: 266.0
  • Bit_score: 162
  • Evalue 2.10e-37

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 792
ATGGCGGACATCGCGCGCGCCGCGAACGTATCGAAGCCCACCGTCTCGCGTGTGTTCAACAACAGCCCGCTGGTGAACGCCGAAACCCGCGAGCGCGTGCTGGAGGCCGCGCGCGCGCAGGGCTATGTCGTCAACCGCAACGCGCAACGCCTGCGGCAGGAGCGCGCCAACACCGTCGCCGTCGTGCTCGACTTCGGCTCGCACCGCCACGGCGCGATCGGCGACCCCTTCATTTTTGAGTTGCTAGCGGGAGTCTCGGAAGCGCTGTCGGTGCGGGAGATCGACCTGCTCCTCTCCCCGGTCGGGCTGGATCGGGTGGATGGGTTCGTCGAGTTGCATCGCTCGCGTGGCGCGGACGGCTTCATCGTGCTGGGCCAGGGCGCGCGCGAGTGGATGCTGTGCGACGTGGCGCGGCGCGGCATCCCGATCGTCGTATGGGGCGCGGTGCATCAGGTTTCCGATTATTGCGCGGTCGGCAGCGACAATTTCCTCGGCGGTCGGCTCGCCGGCGAGCATTTCCTGAAGATGGATCGCCGCCGCTGGCTGTTCGTCGGCGATCCGGCGCATGAGGAATTGCGCCTGCGCTACGATGGTCTGGCAGAGATCGCAGCCACGCATCCCGAAGTGCGGGTCGAGCAGCTGGTGACGGATTCGCTCGCCTTCGCCTCGATCCAGGAGGCGGCCGGGCAATATATCGGGCGCGGCGAGTTGCCGGATGCGGTCTTCGCCTTTTCCGACACCGCCGCGATGGCGATCATCGGCGCTTTCTCACGCCACGGCCATCTCACGCCG
PROTEIN sequence
Length: 264
MADIARAANVSKPTVSRVFNNSPLVNAETRERVLEAARAQGYVVNRNAQRLRQERANTVAVVLDFGSHRHGAIGDPFIFELLAGVSEALSVREIDLLLSPVGLDRVDGFVELHRSRGADGFIVLGQGAREWMLCDVARRGIPIVVWGAVHQVSDYCAVGSDNFLGGRLAGEHFLKMDRRRWLFVGDPAHEELRLRYDGLAEIAATHPEVRVEQLVTDSLAFASIQEAAGQYIGRGELPDAVFAFSDTAAMAIIGAFSRHGHLTP