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SCNpilot_expt_500_bf_scaffold_5569_25

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_67_36

partial RP 33 / 55 BSCG 33 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 19921..20964

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Sphingomonas sp. S17 RepID=F3WWQ7_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 67.1
  • Coverage: 347.0
  • Bit_score: 462
  • Evalue 3.10e-127
  • rbh
DNA, contig: SP636 {ECO:0000313|EMBL:GAN14345.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.1
  • Coverage: 347.0
  • Bit_score: 462
  • Evalue 4.40e-127
efflux transporter, RND family, MFP subunit similarity KEGG
DB: KEGG
  • Identity: 45.0
  • Coverage: 349.0
  • Bit_score: 293
  • Evalue 7.90e-77

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Taxonomy

Sphingomonas paucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1044
ATGCCTGACGTTCCCTCCGCCGCCGCCGCCCCGCGCGGGCTGAAGCAGGCCGGCATCGTCGCCGCGCTGGTCGCGGCGGGCGTGGTCGCGGCCGGCGCCTTCACCCGCAGCCACGATGTCGACGCGGCGACGCGCATCTCTGACGCGCAATCGATCCCCACCGTACACCTGATCGCGGCGAAGGGCGGCGCGGCATCGAGCGCGCTCGAGCTGCCCGGCACGATGCAGGCGTGGAACGCGGCGAAGCTCTACGCGCGGGTCAGCGGCTATGTGCGCGGCTGGTCGAAGGATATCGGCGCGACGGTGGGGGCGGGCACGCCGCTCGGCACGATCGACACGCCGGAGCTGGACCAGCAGATCGTGGAGGCGCGCGCCGCGCTCGCCAGCGCCAGGGCCCATGCCGGCCTCGCGCGCAGCACGGCGGTGCGCTGGAACGACCTGCTTACCACCGCCTCCGTCTCGAAACAGGAGGCGGACGAGAAGAACGGCGATCTCGCGGTGAAGGTCGCCGCCGTGCGCGAGGCGCAGGCCGCGCTCGGCCGGCTGGAGGCGATGAAGTCCTTCGCGGTGGTGCGCGCGCCCTTCGCCGGGGTCGTCACCGCGCGCAACGCCGATATCGGCGATCTCGTCGGCCCCGGCAGCGGGGGCACGCAGCAGCCGATGTTCGCCGTCGCCGACACGCGGCGCATCCGCGTCTATATCAGCGTGCCGCAATCCTATTCGGCGGCGGTGAAGCCCGGCATGGCGGCGGCGCTCAGCGTCCCCGCCTTTCCGGGGCGGAGCTTCCCGGCGCACGTCACCGGCATGTCCGGCGCGGTGGATGCGCAGACCGGCGCGTTCCAGGTCGAGTTGCAGGCGGACAATCCCGGCGACCTGCTGAAGCCCGGCGGCTTCGCGCAGGTCTCGTTCGACCTGCCGGGGCAGGCGGGCGGCGTCGAGGTGCCGTCGAGCGTGCTGCTGTTCCGCTCGGCCGGCAGCGAGGTAGCGACGGTCGATCCGAACGGCCGCATCCGCCTGCGCCGCGTGCAGATCGGGCTGGACAAG
PROTEIN sequence
Length: 348
MPDVPSAAAAPRGLKQAGIVAALVAAGVVAAGAFTRSHDVDAATRISDAQSIPTVHLIAAKGGAASSALELPGTMQAWNAAKLYARVSGYVRGWSKDIGATVGAGTPLGTIDTPELDQQIVEARAALASARAHAGLARSTAVRWNDLLTTASVSKQEADEKNGDLAVKVAAVREAQAALGRLEAMKSFAVVRAPFAGVVTARNADIGDLVGPGSGGTQQPMFAVADTRRIRVYISVPQSYSAAVKPGMAAALSVPAFPGRSFPAHVTGMSGAVDAQTGAFQVELQADNPGDLLKPGGFAQVSFDLPGQAGGVEVPSSVLLFRSAGSEVATVDPNGRIRLRRVQIGLDK