ggKbase home page

SCNpilot_expt_500_bf_scaffold_6143_2

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_67_36

partial RP 33 / 55 BSCG 33 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(607..1248)

Top 3 Functional Annotations

Value Algorithm Source
cell wall hydrolase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CD046 similarity UNIREF
DB: UNIREF100
  • Identity: 55.0
  • Coverage: 218.0
  • Bit_score: 236
  • Evalue 2.30e-59
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 54.9
  • Coverage: 204.0
  • Bit_score: 207
  • Evalue 4.60e-51
Cell wall hydrolase, SleB {ECO:0000313|EMBL:EAT08994.1}; TaxID=314266 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. (strain SKA58).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.5
  • Coverage: 219.0
  • Bit_score: 203
  • Evalue 3.00e-49

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas sp. SKA58 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 642
ATGTCGTTCCATGCCCGGATCGCGGTTGCCGCGACCATGACTCTTGCGATCGTCGGTCTCGCTGCTGGCAGCAGCGCCGGCCTTGCCGCTGAAGTGGCGCCCACCGCGCTCGCGACGATCCAGCCGGCCTATGTGCCGTCGATTCCCAATCCCGTCGTTCCCACCGTCACCCCCGCGCCGGGCGAGGCCGTTGCCGCCGACACGCAGCAGCCGGATGACACCATCGCCTATCCGACGCTCGCCGCCGCGGTCGCCGCGCAGCAGGCCAGGGGCGAGATGGACGACGATCTGCGCTGCCTCGCCGGCGCGATCTATTATGAATCCAAGGGCGAGCCGCTCGCCGGCCAGCTCGCGGTGGCCGAGGTGATCCTCAACCGCGCCGACAGCGGCCGGTTCGGCAGCAGCATCTGCGGCGTCATCACCCAGCCGGGCCAGTTCTCCTTCGTGCGCGGCGGCCGCATTCCCAGCGTCGATCCGTCGCGACCGGCGTGGCGCACCGCGCTGGCGGTCGCCAGGGTCGCGCTCGACGACGCGTGGGAAAGCGACGCCAGCGATGCGCTTTACTTCCACGCCCGCCGCGCCGCGCCGGGCTGGGGCCGGGTCAAGGTCGCCTCGATCGGCAACCACGTTTTCTACCGCTGA
PROTEIN sequence
Length: 214
MSFHARIAVAATMTLAIVGLAAGSSAGLAAEVAPTALATIQPAYVPSIPNPVVPTVTPAPGEAVAADTQQPDDTIAYPTLAAAVAAQQARGEMDDDLRCLAGAIYYESKGEPLAGQLAVAEVILNRADSGRFGSSICGVITQPGQFSFVRGGRIPSVDPSRPAWRTALAVARVALDDAWESDASDALYFHARRAAPGWGRVKVASIGNHVFYR*