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SCNpilot_expt_500_bf_scaffold_6506_2

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_67_36

partial RP 33 / 55 BSCG 33 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(868..2805)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B74A89 similarity UNIREF
DB: UNIREF100
  • Identity: 68.8
  • Coverage: 580.0
  • Bit_score: 832
  • Evalue 2.10e-238
Uncharacterized protein {ECO:0000313|EMBL:GAO54297.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.1
  • Coverage: 578.0
  • Bit_score: 712
  • Evalue 4.50e-202
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 53.8
  • Coverage: 595.0
  • Bit_score: 607
  • Evalue 6.00e-171

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1938
ATGCGTCTGTCGAAAATCGCAACCGTCGCGCTGTGCGGCGCCAGCCTGATGACCACCGCCACCGCGGCGCTGGCGCAGACCGGGGGAGGCGCGCAGCAATCGGCCGACGAGAGCGGCGACGTCGTCGTGCTCGGCTCGCGCATCCCGCGCCTGCAACAGGAAGGCCCGGCGCCGGTGACCACCGTCACCGCCGACGACATCGCGAAGAACGGCTTCCAGAGCGTGCCGGACGTCCTGCGCTCGCTGACGCAGAACGGCGGCGCGACGCAGAGCCAGCAGGATTATTCCAATTCGTCCTTCACGCCGGGCGCGCAGCAGGTCGACCTGCGCGGGCTGGGGCCGAACCATACGCTCGTACTGGTCAACGGCCGCCGCATCGCCGATTTCCCGCTGCCGTTCGAAGGCAACAGCAACTTCACCGATATCTCGAACATCCCGGTCGGGCTGATCGACCAGATCCAGGTGCTGAGCGGCAGCGCCTCGGCGATCTATGGCTCGGACGCGGTGGCGGGCGTCGTCAACTTCAAGATGAAGTCCAAGATGGACGGCACGCAGCTCGATTTCCGCTACGGCGATACGCAGCACGGCGGCGGCGCCTCCTATCGTCTCACCGGCGTGACGGGGTGGGATACGGGACGTTTCCACGGCGTGCTCGGCGTCGAGCTGCTCAACCAGCGCCCGCTGTGGCAATGGCAGCGCTCGCGGCAGGATTCGACCAATGACAATCCGGTGTCACCCGTCGCGCGGCGCACCTTCCTGCGCACCGACGAATATTACGACTATATCAATCCGGGCAAATCGACCTGCGACAAGCTTTCGTCGCTGAACCAGGGCTCGACCTATTATGCGTCGCGGCCCAATTACGACACGTTCGACGGGCCAGGCTATTTCTGCGGCAGCGACAAGTCGGTTGCCTATGGCACGATGCTGTCGGAGCGGAAGTCGATCAACGCCTATAGCTCGCTGGGTCTTGCACTGGGCGAGAAGACCGAATTGTTCGCCGATCTCCAGCTCAGCTATTCAAGGCTGAAGCTGATGCGCGACGTGCTGAGCTGGTATTATGTCGCGCCGGACGGGAATGAGGAGGGCACCTTCTTCAATCCCAACCTGTCGCCCGACGCGACCTATAGCGGCGCGCAGCTCGATAACTGGACGCGCCAGTTCACGCCGGAGGAGATGGGCGGCTTCGGCCCGGCGATGACCCGCAACGATTCGGTCGCGTTCAGCTTCACGCCCGGAATCAGGGGATCGTTCGGGGAGGGTGATCGGTGGCATTACGAGCTGTCGTTCAATCACGCCGAATATCATTCCAAGGTGGCGTTCCCGGAGGTCGTGATCGGCAAGGCCAACGCCTTCTTCCTCGGCCAGCAGCAGGGTGTCGACGAGGCGAGCGGCTATCCGATCTTCGACGCGGACGTGGCGCGGCTCTATACGCCGCTCACCCCGGCGCAATATCGCTCGATCACGGCGGATGCGGTCTATCGGCCGAAATCGTGGGTGAACAATCTCTCCGCCACGGTGAACACCACGCAATTGTTCAACCTGCCGGCCGGCCCGGTCGGCTTCGCGGCGGTGTTCGAGGCGGGCAATCAGGGCTTCAACCTCCGCCCCGATCCGCTGGCGCTGACGCAATATTATGTCGGACTGGTGGATTCGGACGGCGAAGGGCAGCGCGGCCACTGGGGCGGGGGCGTCGAGCTCCGTGTCCCCGTCCTGTCGGTTCTCAGCATCAGCGCGACCGCAATGGCTATGGCCGTTTCACCTACAATGTCGGTGGGGAGTTGCGCCCGACCTCGCACCTGTTGCTGCGCGGCGCCTACGGCACGGGCTTCCGCGCGCCTGACCTCAACTACGTGTTCCGCGGCCCCGGCAACGTCCATTCCGGCGGGACCGATTACTATCAGTGCGCGACCCAGGAGACCGACGATTGCGAGGTGA
PROTEIN sequence
Length: 646
MRLSKIATVALCGASLMTTATAALAQTGGGAQQSADESGDVVVLGSRIPRLQQEGPAPVTTVTADDIAKNGFQSVPDVLRSLTQNGGATQSQQDYSNSSFTPGAQQVDLRGLGPNHTLVLVNGRRIADFPLPFEGNSNFTDISNIPVGLIDQIQVLSGSASAIYGSDAVAGVVNFKMKSKMDGTQLDFRYGDTQHGGGASYRLTGVTGWDTGRFHGVLGVELLNQRPLWQWQRSRQDSTNDNPVSPVARRTFLRTDEYYDYINPGKSTCDKLSSLNQGSTYYASRPNYDTFDGPGYFCGSDKSVAYGTMLSERKSINAYSSLGLALGEKTELFADLQLSYSRLKLMRDVLSWYYVAPDGNEEGTFFNPNLSPDATYSGAQLDNWTRQFTPEEMGGFGPAMTRNDSVAFSFTPGIRGSFGEGDRWHYELSFNHAEYHSKVAFPEVVIGKANAFFLGQQQGVDEASGYPIFDADVARLYTPLTPAQYRSITADAVYRPKSWVNNLSATVNTTQLFNLPAGPVGFAAVFEAGNQGFNLRPDPLALTQYYVGLVDSDGEGQRGHWGGGVELRVPVLSVLSISATAMAMAVSPTMSVGSCARPRTCCCAAPTARASARLTSTTCSAAPATSIPAGPITISARPRRPTIAR*