ggKbase home page

SCNpilot_expt_500_bf_scaffold_6963_12

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_67_36

partial RP 33 / 55 BSCG 33 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(8965..9714)

Top 3 Functional Annotations

Value Algorithm Source
short-chain dehydrogenase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248BB75 similarity UNIREF
DB: UNIREF100
  • Identity: 68.5
  • Coverage: 251.0
  • Bit_score: 339
  • Evalue 2.90e-90
  • rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:KGB56739.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.7
  • Coverage: 251.0
  • Bit_score: 344
  • Evalue 9.60e-92
short-chain dehydrogenase/reductase SDR similarity KEGG
DB: KEGG
  • Identity: 67.1
  • Coverage: 249.0
  • Bit_score: 335
  • Evalue 1.30e-89
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis sp. LC81 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 750
ATGGCTGGATTGTTCGAAGGGAAGACCGCGTTCGTCACCGGCGGGGGCAGCGGCATCGGTCGCGCCACCGCGCTTGCCTTCGCGGCGGAAGGGGCGAAGGTCGTCGTCGCCGACCTGAAGGGCGCCGATGCGGTCGCCGCCGAAATCACCGCGGCGGGCGGCGAGGTGTTCGCGATAGAGCTGGACGTGACCGACGAGGCGGCGGTCAATGCCGCGGTCGATGCGGTGGTGGCGCGCTGGGGGCGCCTCGATTGCGCCTTCAACAATGCCGGCGTGACGCTGGAGATGCTCGGCACGCCGTGGGGCGACCTCGCCGCCTATGACCGCACCGTCGCGATCAACCAGCGCGGCGTGGTGCTGTGCATGGCGGCGGAACTGCGCCACATGGCCGCGCAAAAGAGCGGGGCGATCGTCAACACCTCCTCGATCGCGGGCCTGTCCGGCGCGGGCGGGGCGGCCTATTGCGCCAGCAAACATGCGGTGATCGGCCTCACCCGCTCGGCCGCGCTGCGCTTCGCGGCGGAAGGCATCCGCGTCAACGCGGTCTGCCCCGGCGTGATCGCCACGGCGATGACCGCGCCGATCGCGGCCGATCCGCAGGGCAAGGCCGTGCTCGACCAGATGATGCCGATCGGCCGGATGGGCGAGGCGCGCGAGATCGCCGATGCGGTGATCTTCCTCTGCTCCGACAAGGCGAGCTTCATCACCGGCCACCCGCTTGCGGTCGACGGTGGCTTTGCCGCTCGCTGA
PROTEIN sequence
Length: 250
MAGLFEGKTAFVTGGGSGIGRATALAFAAEGAKVVVADLKGADAVAAEITAAGGEVFAIELDVTDEAAVNAAVDAVVARWGRLDCAFNNAGVTLEMLGTPWGDLAAYDRTVAINQRGVVLCMAAELRHMAAQKSGAIVNTSSIAGLSGAGGAAYCASKHAVIGLTRSAALRFAAEGIRVNAVCPGVIATAMTAPIAADPQGKAVLDQMMPIGRMGEAREIADAVIFLCSDKASFITGHPLAVDGGFAAR*