ggKbase home page

SCNpilot_expt_500_bf_scaffold_8571_2

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_67_36

partial RP 33 / 55 BSCG 33 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(285..1238)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZCH3_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 52.2
  • Coverage: 312.0
  • Bit_score: 304
  • Evalue 1.00e-79
  • rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EGD57745.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.2
  • Coverage: 312.0
  • Bit_score: 304
  • Evalue 1.40e-79
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 47.9
  • Coverage: 309.0
  • Bit_score: 279
  • Evalue 1.10e-72

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium nitrogenifigens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 954
ATGGCCGATGGCGTCGAGACGGTGGATTTCCTGCTGGTGGAGGGCTTTTCCGCGCTCGCCTTCTTCTCGGCGGTCGAGCCGCTGCGCGTCGCCAATCGCATCGCCGGGCGGACGGTCTTTGCGTGGCGGCTCCATTCGGAAAACGGCGAGCCGGTGCCGGCGTCGAGCGCGATGCGCTTCCCGGTCGATCGTCCGCTGGCGGCGATCGCCGCGCCGGGCACGCTGATCGTCTGTGCCGGCTTCCGGCCGGAGCGCGCGGTCGGGCGCGCCGGTCTCGCGGCGCTGCGCCGTTTCGCGCACGACGGCGGGCGGCTCGGCGCGCTCGATACCGGCGTCGAGGTGCTGGCGCGTGCCGGCGTCGCGGGGCGCGGGCCGGTCGCGATCCACTGGGAGGCGGCGCCCGAGTTCCGCGAGCGCTGGCCGGACATCCCCGTCACCGACGCGCTCTACGCGATCGGCGAGCGCGTGTTCACCTGCGCCGGGGGGACGGCGGCGCTCGACATGATGCTGGAGCGGCTGGCGCTGAGCCACGGCCTCGCCTTCGCCCATGCGGTGTCGGAGCAGTTCATCCATGACCGCATCCGCCGCGCGGGCGAGGCGCAGCGGATGGCGCTCGGCCGGCGACTGGCGGTGCGCAACCGCGCGGTGCTGGGGGTGATCACGGTGATGGAGGCGCATCTCGACGCGCCGCTCGCCTCCGCCGCGCTGGCGGCGCGCGCCGGGCTGTCGGTGCGGCAGGTCGAGCGGCTGTTCGACGCGCATGTCGGCATGTCGCCGCAGGATTATTACCGCCGGCTGCGCGTCGAGCGGGCGCGGGCGATGCTGGAAACCACCGAGATGCGCGTGCTCGATGTGGCGCTGGCGACCGGGTTCGATTCAGCCTCCGCGCTTGCCCGTGTGTTTCGTCGGGCTTTCGGCATTAGCCCGGCAGCGGTGCGCAAGCCAGGGCGCTGA
PROTEIN sequence
Length: 318
MADGVETVDFLLVEGFSALAFFSAVEPLRVANRIAGRTVFAWRLHSENGEPVPASSAMRFPVDRPLAAIAAPGTLIVCAGFRPERAVGRAGLAALRRFAHDGGRLGALDTGVEVLARAGVAGRGPVAIHWEAAPEFRERWPDIPVTDALYAIGERVFTCAGGTAALDMMLERLALSHGLAFAHAVSEQFIHDRIRRAGEAQRMALGRRLAVRNRAVLGVITVMEAHLDAPLASAALAARAGLSVRQVERLFDAHVGMSPQDYYRRLRVERARAMLETTEMRVLDVALATGFDSASALARVFRRAFGISPAAVRKPGR*