ggKbase home page

SCNpilot_expt_500_bf_scaffold_8571_7

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_67_36

partial RP 33 / 55 BSCG 33 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(4702..5196)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B48BDA similarity UNIREF
DB: UNIREF100
  • Identity: 71.2
  • Coverage: 163.0
  • Bit_score: 229
  • Evalue 2.80e-57
YbaK/prolyl-tRNA synthetase associated region {ECO:0000313|EMBL:EGD58285.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.2
  • Coverage: 162.0
  • Bit_score: 227
  • Evalue 1.90e-56
YbaK/prolyl-tRNA synthetase associated domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 63.1
  • Coverage: 157.0
  • Bit_score: 195
  • Evalue 1.40e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium nitrogenifigens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 495
ATGAGCGAGGAAGCGCTGCGCGCAGCGTTCGCCGATCATGGCATCGCATGGGACGCGCTGGAGCATCCGGCGGTGTTCACCGTCGAGGAAAGCGCCGCGATCCATGATGCGCTGCCGGGTGCGCATACCAAGAACCTGTTCCTGAAAGATGCCGGAGGCGCGTTCTGGCTGGTGACGGTCGATCATGCCAGGCGTGTCGACCTCAAGGCGCTGGCCAGCGCGCTCGGCGCGCGGAAGCTGAGCTTCGGCAAGGCGGAGGACATGGAGCGGCTGCTCGGCGTCACGCCCGGATCGGTGACGCCGCTCGCCGCGATCAACGATCGCGAGGGCCTGGTGCGCGTGGTGATCGACGCTGATCTCGCGGAAGCGGCGCGGGTCAACGTCCACCCGCTGCGTAACACCGCGACGGTGGGATTGTCGGGGAGCGCGTTACGCGGGTTGCTGGCGCACTGGGGGCATGAGCCGTTGGTGGCGGTGATCGCGGAACGGGCCTGA
PROTEIN sequence
Length: 165
MSEEALRAAFADHGIAWDALEHPAVFTVEESAAIHDALPGAHTKNLFLKDAGGAFWLVTVDHARRVDLKALASALGARKLSFGKAEDMERLLGVTPGSVTPLAAINDREGLVRVVIDADLAEAARVNVHPLRNTATVGLSGSALRGLLAHWGHEPLVAVIAERA*