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SCNpilot_expt_500_bf_scaffold_10025_1

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_67_36

partial RP 33 / 55 BSCG 33 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(1..555)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CFDD5F related cluster n=1 Tax=unknown RepID=UPI0003CFDD5F similarity UNIREF
DB: UNIREF100
  • Identity: 71.8
  • Coverage: 177.0
  • Bit_score: 242
  • Evalue 3.50e-61
Uncharacterized protein {ECO:0000313|EMBL:GAO53487.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.9
  • Coverage: 183.0
  • Bit_score: 258
  • Evalue 8.80e-66
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 50.6
  • Coverage: 180.0
  • Bit_score: 170
  • Evalue 7.00e-40

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 555
ATGATCGAGTTGCGACTTGGCGCCAGTTCGCTGGCGCTGATGACCATGCTGGCGCTGACGCCGGCCGCCTATGGTCAGACACAGACAGCCGACAACGCGCCCGCGACCGCAGGCACCGGCGAGATCGTCGTCACCGCGCAAAAACGCGCTGAGAGCGTGCAGAACGTACCCATCTCGATCGCCGCGTTCGAGGGTGCGACGCTGGAGAAGGCCAATGTCGCGACCGTCTTGGACCTTGGCCAGGTCGCGCCGAATTTCCAGACCATCCGATCCTCCAATACCGGATCGACCCGGATCGGCATCCGTGGTGTCGGATCGCTCGCCAATACGCTGATCGAGCCGAGCGTCGCGGTGTTCGTCGATGGCGTTTATGTGCCGCGCTCGGGCAGCATCCTCGGGACCTTCCTCGACGTGGGGAGCGTCGAGGTGCTGCGCGGGCCGCAGGGCACGCTGTTCGGGCGCAACGCCAGCGTCGGCGCGCTCTCGATCAGCAGCGCGCTGCCGCGCAACGAATTTTCCGGCGAGGTGTCGGGCGAGATCGGGTCGTTCGATCGT
PROTEIN sequence
Length: 185
MIELRLGASSLALMTMLALTPAAYGQTQTADNAPATAGTGEIVVTAQKRAESVQNVPISIAAFEGATLEKANVATVLDLGQVAPNFQTIRSSNTGSTRIGIRGVGSLANTLIEPSVAVFVDGVYVPRSGSILGTFLDVGSVEVLRGPQGTLFGRNASVGALSISSALPRNEFSGEVSGEIGSFDR