ggKbase home page

SCNpilot_expt_500_bf_scaffold_1398_15

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: comp(12165..12824)

Top 3 Functional Annotations

Value Algorithm Source
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.5
  • Coverage: 218.0
  • Bit_score: 291
  • Evalue 1.10e-75
putative 2-isopropylmalate synthase (EC:2.3.3.13) similarity KEGG
DB: KEGG
  • Identity: 62.3
  • Coverage: 215.0
  • Bit_score: 285
  • Evalue 1.00e-74
2-isopropylmalate synthase n=1 Tax=Rhizobium lupini HPC(L) RepID=K5CW77_RHILU similarity UNIREF
DB: UNIREF100
  • Identity: 63.3
  • Coverage: 215.0
  • Bit_score: 288
  • Evalue 5.10e-75

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

bacterium YEK0313 → Bacteria

Sequences

DNA sequence
Length: 660
ATGCAGGCNNNNATCCGCAAGGGATTTGCCGCCCATGAGCGACGCAATGACGGCGTATGGGAAATGCCTTACCTGCCGGTTGATCCCGCCGATATCGGCGAGAGCTACGAGGCCGTTATTCGCGTCAACAGCCAGTCGGGCAAGGGGGGCGTCGCCTGGGTGATCGAGCAGGACAAGGGCCTGAAGCTGCCGCGTGCCATGCAGGTGGATTTCAGCAGGCGCGTACAGCTCCTCGCCGATGAGGCCAAACGGGAGCTGTTGGCTGAAGATATCTGGGAGGCATTCGTGGGCGCCTATCATGTCGATGATGTCGAGCGCTTCGCGCTTGTCGACTTTGAAGGAGGCTTTCGCCGCGGTTCGAGCACCGAACGGGTCTTTGCCGGCCGTATCCGGCACCGGGACCAAGACGTCACCGTCATTGGTCGCGGCAATGGCCTGGTTTCGGCCGTGCTCGCCGCGATTTCCGATGCATTTGGCGTGACGCTCAACGTCATGGACTATCAGGAGCACGCCCTTCGTCGCGGAACGGATGCAAAGGCGGCCGCCTATCTGCAATGCGTCCGGCCGGACGGTGGGCAGGTCTTCGGCGTCGGCATCGATGATGATGTTGCAACCGCAACCGTCAAGGCGGTCCTTAGCGCGGCAAGTGCTGCTGGCTGA
PROTEIN sequence
Length: 220
MQXXIRKGFAAHERRNDGVWEMPYLPVDPADIGESYEAVIRVNSQSGKGGVAWVIEQDKGLKLPRAMQVDFSRRVQLLADEAKRELLAEDIWEAFVGAYHVDDVERFALVDFEGGFRRGSSTERVFAGRIRHRDQDVTVIGRGNGLVSAVLAAISDAFGVTLNVMDYQEHALRRGTDAKAAAYLQCVRPDGGQVFGVGIDDDVATATVKAVLSAASAAG*