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SCNpilot_expt_500_bf_scaffold_2110_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: 1..1026

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CXK7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 46.6
  • Coverage: 343.0
  • Bit_score: 265
  • Evalue 9.40e-68
Uncharacterized protein {ECO:0000313|EMBL:EYR82974.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.6
  • Coverage: 343.0
  • Bit_score: 265
  • Evalue 1.30e-67
putative methyl-accepting chemotaxis sensory transducer similarity KEGG
DB: KEGG
  • Identity: 39.3
  • Coverage: 349.0
  • Bit_score: 219
  • Evalue 1.40e-54

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1026
CAGAGGGTCGAGCACTGCCAGACGGCACATGCAATTGTCGAGGCCTATCTCGCCTCGGAGGCTCCTGCGGACCTGTCGGCCGCCGACCGCAAGCGCCTGTCGCAACTGGCAATGACATTGATCTTCGACCTGCTCGGCGAGACGACTAAGGGCTTCGACCGCGAGACCGCCAAGATCGTCGACAATATCCGCAGCTTCAGCGGCGATATCGGCACGCTGCTTGATCTCTATCGGACGATGATGTCGCAGAGCGGGCAGGACGGTAAAAGTCCGATCAACTCGTTGCGGGGCGATCTGTCAGTCGCCCGGGTCGTCGTCGATCGCATCGACATTGCCGCGGCCGGCGCCAATCGGCTGAGCGAGCAAACGTCCGAGATGGTCAAGGAACTGACTACGAGCATCCTGACTATTCAGCTCGTGCGTCGTGACATTCAATACATGGCCCTCAACACCAATCTACGCTGCGGCAAGCTCGGCGAGGAAGGGCGGGCCATCAATGTGGTCGCCGGCGAGCTACGCTCGTTTGCATCTCTGCTCGATGAGGACGCCGAGAAGATCCTCGTCGGTCTCGGCAAGCTCGAAACGCAGGCGACCGGCCTCAAGGACGGGCGACAGGCCGACGAGGAGGAGAGTTCCGGCGGTCTCGGCACGCATATAGACACGGCTCTTGCCCATATCGGCGAAGCCGGCGCGTCCATGGATCTCAACGTGCAGGAGCTGCGCCGTTGCGGCGAGGCCATGACCTCGCAAGTGAGCGATGTCGTCAAGGGGTTGGATTTCCGTGCCGGCATCGGCGAGACTTTGGCGTCCTGCACGAAGGAGGCCGGCCGCACGCGGAGCGCATTTATCGATACGACAGGACTCGAAGCGCCTGTCGCAGTCATTTCCGAGCGCATCTTCAAGACCTATACCATGGCGGCCGAACGCGAGATCCATGCGGCCATCTTCGGTACGGTGAGCGCCGCGGTCGAAAGCGCACCTGCTCCGGCTAGCGACGAGGATCTCTTCGCGGAAGCTCTCTTTTAG
PROTEIN sequence
Length: 342
QRVEHCQTAHAIVEAYLASEAPADLSAADRKRLSQLAMTLIFDLLGETTKGFDRETAKIVDNIRSFSGDIGTLLDLYRTMMSQSGQDGKSPINSLRGDLSVARVVVDRIDIAAAGANRLSEQTSEMVKELTTSILTIQLVRRDIQYMALNTNLRCGKLGEEGRAINVVAGELRSFASLLDEDAEKILVGLGKLETQATGLKDGRQADEEESSGGLGTHIDTALAHIGEAGASMDLNVQELRRCGEAMTSQVSDVVKGLDFRAGIGETLASCTKEAGRTRSAFIDTTGLEAPVAVISERIFKTYTMAAEREIHAAIFGTVSAAVESAPAPASDEDLFAEALF*