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SCNpilot_expt_500_bf_scaffold_2381_6

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: comp(5670..6617)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type transporter, integral membrane subunit n=7 Tax=Rhizobium meliloti RepID=F6C3P1_SINMB similarity UNIREF
DB: UNIREF100
  • Identity: 85.2
  • Coverage: 305.0
  • Bit_score: 539
  • Evalue 1.80e-150
  • rbh
ABC-type sugar transport system permease component {ECO:0000313|EMBL:EYR83193.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.2
  • Coverage: 314.0
  • Bit_score: 576
  • Evalue 3.20e-161
putative sugar uptake ABC transporter permease; K02025 multiple sugar transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 85.2
  • Coverage: 305.0
  • Bit_score: 539
  • Evalue 5.80e-151
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 948
ATGACCCAATCGGACGTCCTGACGCCGGCAGTGCCGAAGCGACGATCGGCATTTTTCGATCACCTGCCGGCCTATCTCTTCATCTCCCCGTGGATACTGGGATTCCTGTTCTTCACGCTCGGCCCGCTGCTCTTCTCGCTGACGATGAGCTTTTACGATTGGCCCGTCGTGGGTGCGCGCACATTCGTCGGCCTCAAGAATTACCAGACGATGCTGTTTGACGATCCCCAGTTCTGGGACAGTCTCTGGATCACGGTGAAGTTCGCGGCGATCTATGTGCCGTTCAACATCGTCATTTCGTTTCTGGTCGCATTGATGTTGCATCATGCGACCGTGGGAAGCGGCTTTTTCCGTACGGCTTTCTACCTGCCGAGTGTCATCTCCGGTGTTGCCCTTGTGACGATCTGGAGCTGGATCTACAGCCGGCAATACGGTCTCTTGAACTTCATGCTGTCGCTTGTCGGTATCGACGGGCCGAACTGGCTCGGAGATCCCGGCCTTGCGATCATTGCGATCCTTATCGCCAGCCTCTGGGGTTTCGGCGGCACGATGCTGATCCTTCTGACCGGTCTGAAGGCGATCCCGAAGGAGCTTTATGAAGCCGCGACGGTTTCGGGCGTGCCGGGTTGGGCACAAATGCTGTTCATCACCCTGCCGATGCTTGGGCCGATGCTTCTTTTCACCTTCATCACCTCGATCATCGCGGCTTTCCAGCAATTGACGATCGCGCTACTTCTGACCAAGGGCGGCCCGTTGGGCTCCACCTACTTCTTCGCCATGTATATCTACGACAATGCGTTCAAATATTTCGACATGGGTTACGCGGCTGCAGGCTCATGGGTGATGTTCCTCATCGTGCTCGCGCTCAGCCTGCTTGTCATGCGCTGGTCCGCCGCGTGGGTCTATTACGAGGGTGAGGTTCGGGAAAAGGGAGGCGATCATGCGTAA
PROTEIN sequence
Length: 316
MTQSDVLTPAVPKRRSAFFDHLPAYLFISPWILGFLFFTLGPLLFSLTMSFYDWPVVGARTFVGLKNYQTMLFDDPQFWDSLWITVKFAAIYVPFNIVISFLVALMLHHATVGSGFFRTAFYLPSVISGVALVTIWSWIYSRQYGLLNFMLSLVGIDGPNWLGDPGLAIIAILIASLWGFGGTMLILLTGLKAIPKELYEAATVSGVPGWAQMLFITLPMLGPMLLFTFITSIIAAFQQLTIALLLTKGGPLGSTYFFAMYIYDNAFKYFDMGYAAAGSWVMFLIVLALSLLVMRWSAAWVYYEGEVREKGGDHA*