ggKbase home page

SCNpilot_expt_500_bf_scaffold_3724_8

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: comp(7622..8284)

Top 3 Functional Annotations

Value Algorithm Source
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family n=1 Tax=Rhizobium sp. AP16 RepID=J2DDC6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 88.2
  • Coverage: 220.0
  • Bit_score: 377
  • Evalue 1.10e-101
  • rbh
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family {ECO:0000313|EMBL:EJK87939.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.2
  • Coverage: 220.0
  • Bit_score: 377
  • Evalue 1.50e-101
amino acid ABC transporter similarity KEGG
DB: KEGG
  • Identity: 88.2
  • Coverage: 220.0
  • Bit_score: 376
  • Evalue 4.50e-102
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. AP16 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 663
ATGTTTCCGACCTTTGAAGAAATTGCCTCCTGGACGCCTGACCTTCTCGGTGGTCTTTCAATCAGCCTTCAGGTTACCGCGCTTAGCCTTCTGCTTGGTATTCCCTTCGGACTTTTGTTGGCGCTGGGTGTGTTGGCGCGCAACAGGACACTGCGGATCGCTTCGCTTTTGCTTGTCGAAATCGGGCGCGGAGCACCGGCGCTGGTACTTCTGCAATTCATCTATTTCGGACTGCCCAGCGCAGGCTTGACGATCGAATCCTTCGCGGCGGCGGTGATCGCGCTTGCCTGGAATACGGGCGCCTATACCAGCGAGATCATTCGAGCAAGCCTGCTATCGATCCCGCAGGGCCAACGCGAGGCCGCCGAAGCGCTCGGTCTCAACCGTACCGACGAGCTGCGTTATGTCTTGCTGCCGCAGGGTTTGCGTGTGGCGCTGCCGGCGCTTCTCGGTTTCTCGATCCTGATCTTCCAGGGTACTTCGCTGTGCTTCACGATTACCTTACCCGAGCTTGTGAGCAGGGCTTACGAAATTGGCTCCAACACCTTCCGCTATTTTCCGGTTCTGCTTTGCGCAGGCGCTCTTTACGCCTGCATTTCGATACCGGCCGCATGTCTCGTCAGCTATGTCGAGAAGCGTGCCGGCCTCTATGCTCAACGCTAA
PROTEIN sequence
Length: 221
MFPTFEEIASWTPDLLGGLSISLQVTALSLLLGIPFGLLLALGVLARNRTLRIASLLLVEIGRGAPALVLLQFIYFGLPSAGLTIESFAAAVIALAWNTGAYTSEIIRASLLSIPQGQREAAEALGLNRTDELRYVLLPQGLRVALPALLGFSILIFQGTSLCFTITLPELVSRAYEIGSNTFRYFPVLLCAGALYACISIPAACLVSYVEKRAGLYAQR*