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SCNpilot_expt_500_bf_scaffold_3599_11

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: 8514..9167

Top 3 Functional Annotations

Value Algorithm Source
2-isopropylmalate synthase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U7P5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 98.2
  • Coverage: 217.0
  • Bit_score: 421
  • Evalue 6.60e-115
2-isopropylmalate synthase {ECO:0000313|EMBL:ENN86303.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.2
  • Coverage: 217.0
  • Bit_score: 421
  • Evalue 9.20e-115
2-isopropylmalate synthase/homocitrate synthase family protein similarity KEGG
DB: KEGG
  • Identity: 97.7
  • Coverage: 217.0
  • Bit_score: 418
  • Evalue 1.00e-114

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Taxonomy

Rhizobium freirei → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 654
GTGACGCCGGAAAGCGTCGGCAATTTCCGCAAGGTCATGGTATCCGACCAGGGCGGAAAGTCGAATTTCATCAATGCCCTGAAGCGGCGTGGCATTGAAGTCGGCAAGGACGACCCGAAGCTGGACCAGCTGATCCAGCTCGTCAAGGAGCGTGAAGCGACAGGCTACGCTTACGAAGGCGCGGATGCGAGCTTCGAACTGCTCGCTCGCCGCACGCTTGGCACCATCCCGGAATTCTTTGCGATCGACGGCTTCCGCGTCATGGTCGAGCGCCGCTTCGATTCCCACGGCCGCGTGAAGATCGTCTCAGAAGCCGTGGTCAAGATCATCATCGACGGCGAGACCATCATGTCGGTTGCCGAAGGCGATGGCCCGGTCAACGCGCTCGACCTGGCGCTGCGCAAGAACTTCGGCAAATACCAGCACGAGATCGACGACCTCGAACTGGCCGACTTCAAGGTGCGTATCCTCAATGGCGGCACGGAAGCCATCACCCGCGTCCTGATCGAATCCACCGACAGCGACGGCGTGCGCTGGTGGACGGTCGGCGTGTCGGAAAATATCATCGACGCCTCGTTCCAGGCATTGATGGATTCCGTCATCTACAAGCTGATGAAGAACCGGCATATGGCGGGCAAGATCGCGGCGGAGTGA
PROTEIN sequence
Length: 218
VTPESVGNFRKVMVSDQGGKSNFINALKRRGIEVGKDDPKLDQLIQLVKEREATGYAYEGADASFELLARRTLGTIPEFFAIDGFRVMVERRFDSHGRVKIVSEAVVKIIIDGETIMSVAEGDGPVNALDLALRKNFGKYQHEIDDLELADFKVRILNGGTEAITRVLIESTDSDGVRWWTVGVSENIIDASFQALMDSVIYKLMKNRHMAGKIAAE*