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SCNpilot_expt_500_bf_scaffold_4026_6

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: 4057..4608

Top 3 Functional Annotations

Value Algorithm Source
Translation initiation factor IF-3 n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LED2_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 95.1
  • Coverage: 183.0
  • Bit_score: 346
  • Evalue 1.30e-92
  • rbh
infC; translation initiation factor IF-3 similarity KEGG
DB: KEGG
  • Identity: 95.1
  • Coverage: 183.0
  • Bit_score: 346
  • Evalue 4.20e-93
  • rbh
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.1
  • Coverage: 183.0
  • Bit_score: 346
  • Evalue 1.90e-92

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Taxonomy

Rhizobium tropici → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 552
GTGGAGAGTACGACCATTCGCAGACCCTTTAAAACCGATGCGCCCGTAAAGGACGGGCCACGTTCCAACAGGGAAATTCGCATTCCCAAAGTTCAGCTGATCGCAGCTGACGGCGCGAATATGGGCATCGTCCCGACCGACCAGGCATTGAAGATGGCAGAGGAGGCCGGCCTCGATCTGGTTGAGATTTCTCCCAATGCTGAGCCGCCTGTGTGCAAGATCCTCGACCTGGGCAAGCTGAAATACGCCAACCAGAAGAAGGCCGCCGAGGCGCGCAAGAAGCAGAAGATCGTTGAAGTCAAAGAAATCAAGATGCGCCCGAACATCGACACCCATGACTATGAGGTGAAGATGAAGGCCATCGGTCGTTTCTTCGAAGAAGGTGACAAGGTGAAGGTGACCTTGAAGTTCCGTGGCCGTGAAATGGCCCACCAGGAACTCGGTATGAAGCTTCTTCAGCAGGTCAAGGAAGATACGCTTGAGATCGCCAAGGTGGAGGCCGAGCCCAAGCTTGAAGGCCGCCAGATGATGATGGTGCTTGCGCCCAAGTGA
PROTEIN sequence
Length: 184
VESTTIRRPFKTDAPVKDGPRSNREIRIPKVQLIAADGANMGIVPTDQALKMAEEAGLDLVEISPNAEPPVCKILDLGKLKYANQKKAAEARKKQKIVEVKEIKMRPNIDTHDYEVKMKAIGRFFEEGDKVKVTLKFRGREMAHQELGMKLLQQVKEDTLEIAKVEAEPKLEGRQMMMVLAPK*