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SCNpilot_expt_500_bf_scaffold_5167_3

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: comp(2590..2904)

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator protein, LysR family n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UZI4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 95.2
  • Coverage: 104.0
  • Bit_score: 211
  • Evalue 3.80e-52
Putative transcriptional regulator protein, LysR family {ECO:0000313|EMBL:ENN86131.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.2
  • Coverage: 104.0
  • Bit_score: 211
  • Evalue 5.30e-52
transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 91.3
  • Coverage: 104.0
  • Bit_score: 204
  • Evalue 1.50e-50

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Taxonomy

Rhizobium freirei → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 315
ATGTTCAGCTGGGAGGTTTGGCTGCGCAAGGCCGGGCTTTCAGGCCATTGCATGGAAGAACGGCACATCTTCAACGATGCATCGCTTTGCCTGGATGCTGCGATGGCAGGGCAGGGCGTCATGCTTGCCTGGCAGACGCTGGCGGCCTATGCGCTTGAGCAGAAATGCCTTGTCGATCCCTTCGGTATCCGAGCAACGACCGGCTTCGGCCATTACTTCGTCACTGCCGAGGGCGTGCGCGAGCCAAAGAAAGTGACCGCCTTCAAGGCCTGGATACGCGAGGAAATGGAAGAGAGCATCCGCCTCTTCCAATAG
PROTEIN sequence
Length: 105
MFSWEVWLRKAGLSGHCMEERHIFNDASLCLDAAMAGQGVMLAWQTLAAYALEQKCLVDPFGIRATTGFGHYFVTAEGVREPKKVTAFKAWIREEMEESIRLFQ*