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SCNpilot_expt_500_bf_scaffold_7785_7

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: comp(5989..6714)

Top 3 Functional Annotations

Value Algorithm Source
Bkd operon transcriptional regulator n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CRD3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 91.4
  • Coverage: 163.0
  • Bit_score: 288
  • Evalue 5.60e-75
Transcriptional regulator {ECO:0000313|EMBL:EYR83866.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.4
  • Coverage: 163.0
  • Bit_score: 288
  • Evalue 7.90e-75
AsnC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 67.7
  • Coverage: 161.0
  • Bit_score: 226
  • Evalue 8.30e-57

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 726
ATGGTTGGCATTGTGGATCATCCAGCAGGCATGCCAAAGGACCTGCCGCTCCAGATCCTTCAGATGGGCCAGTGTTGCCGGCGTCGGGGCCTGCGCACTCATCGTCGTCTCTCCTCCATATCCTCTTGGCGAAATGCTACACCCGGATCTGAGGTAAAACTGGTCTCAGTTGACCTGAATTTGATGAAATGCGAAACGTTCTTTCGAAAATTACCATTTTATCGGTTTGTCATGCCTATTTCCAGACTTCACCTCGATGCAGCCTCCATCAGGATTCTCGATCTCCTGCAGCAGAATTCCGAAATGAGCATTTCGGATCTTGCCGAAGCGACTGGGCTTTCGGCTTCGCCTTGTTGGCGACGGGTCAACGAACTCAAGGAAAGCGGCCTCATCAAAGGCGCGGTGGCCCTGGTCGATGCGCAGTCGCTCGGGCTTGCCGTGAATGTCTTCGTGCAGGTCTCCCTGAAGCAGCAGGACCGGGAATCGCTCGACGTGTTCAATGCCGCCATCAAGACCAAGCCGGAAATCGTCGAGTGCTATCTGATGACGGGCGAGGCCGACTACATGCTACGGGTGGTGGTGGAGGACCTGATGAAATTCCAGGCACTGGTGGTGGATTTCCTGACCCGCATTCCTGGGGTCGCCAATATCCGCTCGAGCTTCGCCCTCAGCCAGATCAAATACACGACCGCGCTGCCGACCGACCACCTGAAGTCGAGAGGCTGA
PROTEIN sequence
Length: 242
MVGIVDHPAGMPKDLPLQILQMGQCCRRRGLRTHRRLSSISSWRNATPGSEVKLVSVDLNLMKCETFFRKLPFYRFVMPISRLHLDAASIRILDLLQQNSEMSISDLAEATGLSASPCWRRVNELKESGLIKGAVALVDAQSLGLAVNVFVQVSLKQQDRESLDVFNAAIKTKPEIVECYLMTGEADYMLRVVVEDLMKFQALVVDFLTRIPGVANIRSSFALSQIKYTTALPTDHLKSRG*