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SCNpilot_expt_500_bf_scaffold_7694_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: 2..331

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Rhizobium sp. CF142 RepID=J2L0Q1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 92.7
  • Coverage: 109.0
  • Bit_score: 201
  • Evalue 4.10e-49
Transcriptional regulator {ECO:0000313|EMBL:EJJ27022.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.7
  • Coverage: 109.0
  • Bit_score: 201
  • Evalue 5.80e-49
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 74.8
  • Coverage: 103.0
  • Bit_score: 160
  • Evalue 4.30e-37

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Taxonomy

Rhizobium sp. CF142 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 330
TTAGACGAAGGCATGCCGGCAACGGCCATTTTCGCCAGCTCCGACGAAATCGCCATCGGTATGATCGAAGTCCTGAGGGAAAGGGGGATTTCGATCCCCGAGGACCTGTCTCTCATCGGCTTCGACGATGTCAGCCCCTTACATCTTTTTGCGCCGCCCGTGACGGCTATCCGGCAGCCGGTGCGCACCATCGGGCAACGCGCGCTCGCCCTTCTTCTTGAGACAAACTGGCAGGAGAGCAAATCGCTCGCCACAGAGGAACTCGTGCCAGTCGAAATCGTCGTGCGGAAATCCGTTGCACCGCCTTCGACACATAACAAGCAACGATAA
PROTEIN sequence
Length: 110
LDEGMPATAIFASSDEIAIGMIEVLRERGISIPEDLSLIGFDDVSPLHLFAPPVTAIRQPVRTIGQRALALLLETNWQESKSLATEELVPVEIVVRKSVAPPSTHNKQR*