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SCNpilot_expt_500_bf_scaffold_8408_12

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: comp(7400..8185)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, LuxR family n=1 Tax=Rhizobium freirei PRF 81 RepID=N6TW17_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 92.9
  • Coverage: 255.0
  • Bit_score: 458
  • Evalue 4.50e-126
  • rbh
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ENN84629.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.9
  • Coverage: 255.0
  • Bit_score: 458
  • Evalue 6.30e-126
two component LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 62.3
  • Coverage: 212.0
  • Bit_score: 248
  • Evalue 1.70e-63

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Taxonomy

Rhizobium freirei → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 786
ATGTTGGGGGTAACGGCCATGATTGGACAATCGATAACAGGTGAAAAATTCGCGTCAGATACCGGCGCACGCATCATTTCAGTTCGGACATCCGATACTTTGAGACCATTCATCGCATCCGGCGCACCAGGCATCGATGAATGGGAAGACTATATTCTTCTCATAGATTCTCGCGCTCTCGATCGTGAGTGCCTGTCGAAAAGCCTGACCGAATGCGATAGCGCTATGCATATCGTCACCGTCGGTTCGCTCGACGAATGGCAGACGCGCAACATGCAGGTGTTGCCGTCAGCAGTTCTTTTCATGATCGGCGGCCGCAAGGTCTCCGATGCCGATGTCAGCGCCAAGATCTGCGCTCTTGTGGAGAGGTTTCAGACAAGTCCGGTGATTGTGGGGGCTGATGGCGACGAGCTTGCACAGCTGCTGCACGCGCTGGAATGCGGTGCTCGCGGTTATATTACGACCAGTGTCGGCATCAAAGTCGCCGCGGAAGCGGTCGCTTTGGCACGGGCGGGCGGCGTCTTCGTGCCGGCAAGCAGCCTGCTGGCCGCCAAGGAGGCGATCGCTCCCGTGGCCAGTCGCAATTGCTGCCTGGACAGCCTGTTCACACCGCGCGAAGTCGTCGTCGCTGAGGCGTTGCGGCGGGGAAAGGCAAACAAGATCATCGCCTATGAGATGGATCTTTGCGAGAGCACGGTCAAAGTGCATATCCGCAATATCATGAAGAAGCTGAACGCGACGAACCGAACTGAGGTCGCCTACAAGATCCGGGAACTCGTTCGGTAA
PROTEIN sequence
Length: 262
MLGVTAMIGQSITGEKFASDTGARIISVRTSDTLRPFIASGAPGIDEWEDYILLIDSRALDRECLSKSLTECDSAMHIVTVGSLDEWQTRNMQVLPSAVLFMIGGRKVSDADVSAKICALVERFQTSPVIVGADGDELAQLLHALECGARGYITTSVGIKVAAEAVALARAGGVFVPASSLLAAKEAIAPVASRNCCLDSLFTPREVVVAEALRRGKANKIIAYEMDLCESTVKVHIRNIMKKLNATNRTEVAYKIRELVR*