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SCNpilot_expt_500_bf_scaffold_8543_3

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: comp(1319..2146)

Top 3 Functional Annotations

Value Algorithm Source
Transcription regulator protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V5P0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 77.5
  • Coverage: 271.0
  • Bit_score: 429
  • Evalue 3.10e-117
  • rbh
Transcription regulator protein {ECO:0000313|EMBL:ENN86377.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 271.0
  • Bit_score: 429
  • Evalue 4.30e-117
transcriptional regulator protein; K13652 AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 70.2
  • Coverage: 275.0
  • Bit_score: 406
  • Evalue 6.70e-111
  • rbh

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Taxonomy

Rhizobium freirei → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 828
ATGAAAATCACCACGGAACAAAGCTATCGCAGGCGTATCGCCCGGGTCATCGAAGCGATCATGCTCGATCCCGCGGCACCGCACTCCGTCGAAAGCCTGGCTGATGTCGCCCATTTCTCGCCTTTTCATTTTCACAGGCTCTACCGGGCGATGACGGGCGAGAGCGTCGCGGCGACGATCCGCCGCGTGCGGCTTGCGCAGGCGGCCTATCAATTGGCGACAGGTCCTTCCTCCGTTACCGATGCCGCGCTGGAGGCGGGGGATGACAGCTCCCAGAGCTTCGCGCGTGCCTTTCGCAGCATGACGGGTCTTACTCCAACCGATTTCCAGCTGCAGCAGCAGGCGATCACAACAAATCTGCCCTCCGTTACTGTCCTCGACCAGCCTCCCGCAAAAGCCTTCGGGTTGCATCACCAGGGGCCGGCCCAGACGATACCGCATACCTTTCGCCGGCTCGCGCAAAGGCTGGCGGAACGCGGAAGCGCATGGCACGACATGACCCGCATAGGCATCGGTTCCGGCGATCCCGAGCAGGGCGAGGGGTTCTGGTATTTCGCGGGCGTCGTGCTGCCGCCGGATGACCCTGCCGCAGACGGCCTGGAGCAATGCGACATGCCTGGCGGCCTCTACGCCCGCTATCGGCTCATGGGGCCATATACCCTCATTTCACCGACCTTTCAGACACTCTTCGGCGGCTGGCTGCCACAGAGCGGCTACGAGCCTGACGACCGTCCCGTAATTGAGGCCTATCTCAACCATCCGGCCAAGGTGGCGGAGCGCGAAATAGCCACCGATCTGCTGATTCCGTTGCGTCGCACCGCAGACTGA
PROTEIN sequence
Length: 276
MKITTEQSYRRRIARVIEAIMLDPAAPHSVESLADVAHFSPFHFHRLYRAMTGESVAATIRRVRLAQAAYQLATGPSSVTDAALEAGDDSSQSFARAFRSMTGLTPTDFQLQQQAITTNLPSVTVLDQPPAKAFGLHHQGPAQTIPHTFRRLAQRLAERGSAWHDMTRIGIGSGDPEQGEGFWYFAGVVLPPDDPAADGLEQCDMPGGLYARYRLMGPYTLISPTFQTLFGGWLPQSGYEPDDRPVIEAYLNHPAKVAEREIATDLLIPLRRTAD*