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SCNpilot_expt_500_bf_scaffold_661_20

Organism: SCNPILOT_EXPT_750_P_Devosia_62_26

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 11 / 38 MC: 2
Location: comp(15643..16233)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Burkholderia sp. (strain 383) RepID=Q39NW5_BURS3 similarity UNIREF
DB: UNIREF100
  • Identity: 23.3
  • Coverage: 163.0
  • Bit_score: 70
  • Evalue 2.00e-09
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 23.3
  • Coverage: 163.0
  • Bit_score: 70
  • Evalue 6.20e-10
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABB05851.1}; TaxID=482957 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia lata (strain ATCC 17760 / LMG 22485 / NCIMB 9086 / R18194; / 383).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 23.3
  • Coverage: 163.0
  • Bit_score: 70
  • Evalue 2.80e-09

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Taxonomy

Burkholderia lata → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 591
ATGAACAAAAAATACAGCCGCACGCAGACCGCCATAAGCAATTCGGTTTTGAAACTGGCCAGCACGCTGGACTTCAAAGACATTACCGTGCAGATGGTGATCGATGATGCCGGAACAACAAGACCAACATTCTACAATCACTTTCGAGATGTAGAAGACGCAGCGCGTTTTACTGCCATATCCATGATGTCGGTGACGACAGAGGTGCCGCCGCAACCTGCCGAATGGGTGCCCAGGGACGCAGACTTCATCGCCAACCGCATCCGCGTCCAGGTCCGGCCCGTACTCGAAATCGTCGCCAGTCACCGCGCCTTCTTCCGCCGGGTGCTGGAGCAGGCTGCAAATCTCGACTATTTCAACCAGACCGTGGCCATGTTCATGTCCAAGGCGGACTGGGAATTTCGCATGGCGACCGAGAAAGTGCGCTCCAGCACCGACATGGATGTGCTCGAGATCGTCGCCAACGGCGCCATGTGGATGGTGATCAAGTGGACGCTGGGCGACAACGAGGCCAGCGTGGACGAATTGACCGACCGCTTCGCCCTCACGCTGACCGCGCTTGTCAGTGGTCAATTGCTCCAGACCGAATAG
PROTEIN sequence
Length: 197
MNKKYSRTQTAISNSVLKLASTLDFKDITVQMVIDDAGTTRPTFYNHFRDVEDAARFTAISMMSVTTEVPPQPAEWVPRDADFIANRIRVQVRPVLEIVASHRAFFRRVLEQAANLDYFNQTVAMFMSKADWEFRMATEKVRSSTDMDVLEIVANGAMWMVIKWTLGDNEASVDELTDRFALTLTALVSGQLLQTE*