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SCNpilot_expt_500_bf_scaffold_1675_13

Organism: SCNPILOT_EXPT_750_P_Devosia_62_26

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 11 / 38 MC: 2
Location: comp(10962..11294)

Top 3 Functional Annotations

Value Algorithm Source
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.0
  • Coverage: 80.0
  • Bit_score: 149
  • Evalue 2.60e-33
2-isopropylmalate synthase (EC:2.3.3.13); K01649 2-isopropylmalate synthase [EC:2.3.3.13] similarity KEGG
DB: KEGG
  • Identity: 73.1
  • Coverage: 78.0
  • Bit_score: 118
  • Evalue 1.90e-24
2-isopropylmalate synthase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YVS1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 63.1
  • Coverage: 103.0
  • Bit_score: 124
  • Evalue 6.50e-26

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Taxonomy

Devosia chinhatensis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 333
ATGTCTGCTTCTGCGTCCAATTCCAATAAAGAACGCGTCTTCATTTTCGACACCACCCTGCGCGATGGCGAGCAGTCGCCCGGCGCCACCATGACGCTGGAAGAAAAGCTGCAGGTTGCAGACGCGCTGGACGAAATGGGCGTCGATATTATCGAAGCCGGTTTCCCGATTGCTTCGGTGGGTGACTTCGAGGCCGTGGTCGCCGTCGCCAAGCATGTCAAGCGCGCCCGCGTCGCTGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCAGGGCCGCATCCACACCTTTGTCTCCACCTCGCCGATCCATCTGGCCCACCAGATGA
PROTEIN sequence
Length: 111
MSASASNSNKERVFIFDTTLRDGEQSPGATMTLEEKLQVADALDEMGVDIIEAGFPIASVGDFEAVVAVAKHVKRARVAGXXXXXXXXXXXSRAASTPLSPPRRSIWPTR*