ggKbase home page

SCNpilot_expt_500_bf_scaffold_2378_13

Organism: SCNPILOT_EXPT_750_P_Devosia_62_26

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 11 / 38 MC: 2
Location: 17106..18518

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, XRE family n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CWP5_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 54.6
  • Coverage: 471.0
  • Bit_score: 495
  • Evalue 5.90e-137
  • rbh
Cro/Cl family transcriptional regulator {ECO:0000313|EMBL:KKB08066.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.8
  • Coverage: 470.0
  • Bit_score: 784
  • Evalue 8.90e-224
DNA-binding protein; K07110 similarity KEGG
DB: KEGG
  • Identity: 52.4
  • Coverage: 473.0
  • Bit_score: 477
  • Evalue 5.20e-132
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Devosia chinhatensis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1413
ATGGGCGCCAGGAAGGTGTTCGCCGGCGCGCGTTTGCGGGCCCTGCGCGCTCAGCACAAATTAACCCAGGCCGAACTGGCCGGGCGGCTCGATATTTCGCCGTCTTATGTCAATCAGCTCGAATCCAACCAGCGCCCGCTGACCGCGGCGGTCATGCTGGCGCTTTCGGAGCATTTTCACCTGGATCTGGCGAGCCTGGCCACCGATGCCTCGGACCGGCTGGTGCTGGATTTGCGCGAAGCCCTGGCCGACCCGGTATTCGGTGAGGCGGTGCCGCATTTGCAGGATCTCAAAACCGTGGCCAGCAATGCGCCGGACATGGCGCGTGCCATGCTGGCGCTCTACGACGCCTATCGCAAATCCAATGAGCGCCTGGCGGGCATGGATGCGGCGCTGACCCGCGACCCCGGCTCCAGCGTGCAGACCGCCTATGAGGAAGTGCGCGACTTCTTCCACTATGCCGACAACTATATCGATCCGCTCGACCGCGCCGCCGAGGCGCTGGCCACTGAGTTGGGTGAGTTCGGCCCCGACCGGCTGCGCCGATTGATCGACTATTGCGCCGAAATACACAATATAAGGGTCATTCGCGATGCGCCGGGCCAGACCGAGCGGCTGGTGGACTTCGACCGCGCCAATCGCGATCTCTGGATCAACAGTTTGTTGGAGCCATCAAGCCAGTTTTTCCAGATTGCCACCGTTCTGTGCGGGCTGGAGCAGACCACGCTTCTCGACAGCCTGCTCGATGGCGCCAATTTCAAGACCGCCGAGGCGCGGGGTATCGCCCGCATGGGGTTGGCCAACTACTATGCCGGGGCATTGCACATGCCCTATGGCGCCTTTCTCAAAGCGGCCGATGGCTATCGTTTCGATATCGAGCAGTTGGCGCGGGTGTTCGGGGCCAGCCTTGAACAGGTGGCCCATCGCCTCTCCACCATGCAAAGACCGCGCGAACGCGGCGTGCCGTTCTTCTTTGCCCGGGTGGATGCGGCCGGGACCATCACCAAGCGCCATTCCGCGACAGCCCTGCAATTCGCCCGTTTCGGCGGAGCCTGTCCGCTCTGGAATGTGCACCGGGCCTTCGAGGCACATGGCCAGATCATCAGGCAATTGGCCGAAACGCCGGATGGCAAGCAATATCTCTGCCTCGCCTGGAGCCATGAAAAGCGTCTGGGCGGCTATCGCGGCACCACGCGGCGCTATGCCTATGCGCTGGGCTGCGAAATCACCCATGCCGGGCGGCTGGTCTATGCCGACGATCTCGATCTGGGCAAAGCCGGTTTCGAGCCCATCGGCATTTCCTGTCGCATCTGCGAGCGGCGCAATTGCCCGCAGCGCTCGGTCCCGCCCTTGGCGGCCAGTATCAGTGTCCCGACGGACCGGCGCAGCGTCGTGCCTTACGAGATCGGCTGA
PROTEIN sequence
Length: 471
MGARKVFAGARLRALRAQHKLTQAELAGRLDISPSYVNQLESNQRPLTAAVMLALSEHFHLDLASLATDASDRLVLDLREALADPVFGEAVPHLQDLKTVASNAPDMARAMLALYDAYRKSNERLAGMDAALTRDPGSSVQTAYEEVRDFFHYADNYIDPLDRAAEALATELGEFGPDRLRRLIDYCAEIHNIRVIRDAPGQTERLVDFDRANRDLWINSLLEPSSQFFQIATVLCGLEQTTLLDSLLDGANFKTAEARGIARMGLANYYAGALHMPYGAFLKAADGYRFDIEQLARVFGASLEQVAHRLSTMQRPRERGVPFFFARVDAAGTITKRHSATALQFARFGGACPLWNVHRAFEAHGQIIRQLAETPDGKQYLCLAWSHEKRLGGYRGTTRRYAYALGCEITHAGRLVYADDLDLGKAGFEPIGISCRICERRNCPQRSVPPLAASISVPTDRRSVVPYEIG*