ggKbase home page

SCNpilot_expt_500_bf_scaffold_2327_4

Organism: SCNPILOT_EXPT_750_P_Devosia_62_26

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 11 / 38 MC: 2
Location: 3236..4300

Top 3 Functional Annotations

Value Algorithm Source
Beta-xylanase {ECO:0000256|RuleBase:RU361174}; EC=3.2.1.8 {ECO:0000256|RuleBase:RU361174};; TaxID=1336745 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter DSM 30147.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.1
  • Coverage: 358.0
  • Bit_score: 388
  • Evalue 8.20e-105
xynA; endo-1,4-beta-xylanase; K01181 endo-1,4-beta-xylanase [EC:3.2.1.8] similarity KEGG
DB: KEGG
  • Identity: 55.3
  • Coverage: 358.0
  • Bit_score: 383
  • Evalue 5.90e-104
  • rbh
endo-1,4-beta-xylanase n=1 Tax=Agrobacterium sp. 224MFTsu3.1 RepID=UPI0003718631 similarity UNIREF
DB: UNIREF100
  • Identity: 56.4
  • Coverage: 358.0
  • Bit_score: 390
  • Evalue 1.50e-105
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1065
ATGACCATTACGCGACGACATTTTCTTAAACAGGGCACTACCCCGTTCATGGCAGCAGCGCTTGCGCCGTGGCTGACGAGTCCTGCCTTTGCACAGCAGAACATGCCGTTCGGGGCGGCGCTTTATTGGCCCGACATGGCGATCGAGCCGCGGCTGGGGCCGGAGATCGCACGCTGGTGCCAACGCATCACGCCGGTGCAGGAAATGAAGTTCGAACTGCTGCGGCCATCCGAGGGCGCTTGGGACTTTTCGCAGGCCGACGCGCTGGTGGACTATGCGCGTGTGAACAGCCTTGCCGTGCATGGCCATACGCTGGTCTGGTATGCAGCGCTGCCCGAATGGGTTTCGAAGATTACCTCAGCGGCAGCGGCCGAGGCGCTGATGACTGAGCATATCGAGACGCTGATGCAGCGCTATCCCGACATAACCAGCTGGGACGTGGTCAACGAAGCAATTCCGGATGTGCCGGATGGCGTTAAGTCACGGCGAGATGGGTTTTGGCAGGAACGGTTGGGCGAGGACCATATCGCCATGGCGTTTCGCAAGGCGCATGAACTGTCTCCGCACAGTACGCTGGTGCTCAACGAATATGATGTCGAATTTGCCGATGAATATGGTCCGGCCAAGCGGGCGGCGTTCCGCGATCTGATCCAGAGCCTGCTCGACAAAGGGGCGCCGGTGACCGCTATCGGCTTCCAGGGGCATCTGCGCGGGGGCAGGGCGATCGCCAAGGACGAACTGGCTGCATTCGTTGCCGAGCTCAAATCCTGGGGGCTCGACGTGCTGGTGACGGAACTGGATGTCATCGACGTCAACCTGCCTAGGGATGCCGATGAACGTGATCGGGTGATCGCGGCGCAGGTTCGCGATTTTCTCAAGGCCATTGCGGATGGTGGCGGGGCGAGTTCGATCACCACCTGGGGGATCAGCGATCCCTATAGCTGGATCCGCTGGGCCTATCCGCGCCCCGATGGCACACCCAACCGGCCCTTGCCTTTGGATGAGAATTTTAAGCCAAAGCTGTTCATGGATGTCATCGACGATTTCCGGAACGGGACTTTGTGA
PROTEIN sequence
Length: 355
MTITRRHFLKQGTTPFMAAALAPWLTSPAFAQQNMPFGAALYWPDMAIEPRLGPEIARWCQRITPVQEMKFELLRPSEGAWDFSQADALVDYARVNSLAVHGHTLVWYAALPEWVSKITSAAAAEALMTEHIETLMQRYPDITSWDVVNEAIPDVPDGVKSRRDGFWQERLGEDHIAMAFRKAHELSPHSTLVLNEYDVEFADEYGPAKRAAFRDLIQSLLDKGAPVTAIGFQGHLRGGRAIAKDELAAFVAELKSWGLDVLVTELDVIDVNLPRDADERDRVIAAQVRDFLKAIADGGGASSITTWGISDPYSWIRWAYPRPDGTPNRPLPLDENFKPKLFMDVIDDFRNGTL*