ggKbase home page

SCNpilot_expt_500_bf_scaffold_2524_4

Organism: SCNPILOT_EXPT_750_P_Devosia_62_26

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 11 / 38 MC: 2
Location: comp(3226..3387)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CDE9EE related cluster n=1 Tax=unknown RepID=UPI0003CDE9EE similarity UNIREF
DB: UNIREF100
  • Identity: 64.2
  • Coverage: 53.0
  • Bit_score: 69
  • Evalue 9.20e-10
L-arabinose-binding periplasmic protein AraF {ECO:0000313|EMBL:KFC62546.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.4
  • Coverage: 53.0
  • Bit_score: 84
  • Evalue 3.90e-14
sugar ABC transporter substrate-binding protein; K10546 putative multiple sugar transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 64.2
  • Coverage: 53.0
  • Bit_score: 69
  • Evalue 2.90e-10

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Devosia sp. LC5 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 162
GTGCTGAGCGGCAATGCACCGGCCGATCTCGACAACAGCACCTATAATAACGGCAACAAGGTTGTGCCGTCCAAGCTGCTGACCCCCTACGAGGTCGATGCGAAGAACTACAAGGAACTGGTCGTCGACTCCGGTTATATCTCGGAAGCTGACCTGCAGTAA
PROTEIN sequence
Length: 54
VLSGNAPADLDNSTYNNGNKVVPSKLLTPYEVDAKNYKELVVDSGYISEADLQ*