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SCNpilot_expt_500_bf_scaffold_3217_12

Organism: SCNPILOT_EXPT_750_P_Devosia_62_26

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 11 / 38 MC: 2
Location: comp(7688..8164)

Top 3 Functional Annotations

Value Algorithm Source
Tetracycline resistance protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RDJ5_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 45.2
  • Coverage: 157.0
  • Bit_score: 127
  • Evalue 1.40e-26
Tetracycline resistance protein {ECO:0000313|EMBL:KFC66117.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.9
  • Coverage: 151.0
  • Bit_score: 201
  • Evalue 6.40e-49
tetracycline resistance protein; K08151 MFS transporter, DHA1 family, tetracycline resistance protein similarity KEGG
DB: KEGG
  • Identity: 45.2
  • Coverage: 157.0
  • Bit_score: 127
  • Evalue 4.50e-27

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Taxonomy

Devosia sp. LC5 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 477
ACAATCGGCCTCGCGGCGGCGGCAATCGCCTTTGCCGGCATCGCCTTTTCAGCCGATGTCTACCAGCTCTACCTGTTCATTGCCGTCGGCACGGTCAGCGGCCTGGCCCCACCAGCCATCAATGGCCTGCTCTCTCGTCAGGTGCCCGACAACAGCCAGGGGGAATTGCAGGGCGCGGTGAACGCGGCAAGCTCGCTAGCCACCATTATCGGCCCGCTCGCGGCAACGCAGATCTTTTCATATTATTCCGCCGCCCCGAGCTCGGGCCATTACTTCCCCGGCGCGCCGTTCATAGCCTGCGGAATAGCCGTGGTGATAGCCGTCCTGATCTTTGCCATCGCCTCGTTCCGCTTCGAGCTGGGGCGTCGTCCGAGCGTCGCCGATCACCCGCATGTGCCCGAGATGCCCCCGCCCGGACAGGTCCGCAATGCGCCATTGGAGACTGGGAATGACGACGACAATTCGCGCCGCTACTGA
PROTEIN sequence
Length: 159
TIGLAAAAIAFAGIAFSADVYQLYLFIAVGTVSGLAPPAINGLLSRQVPDNSQGELQGAVNAASSLATIIGPLAATQIFSYYSAAPSSGHYFPGAPFIACGIAVVIAVLIFAIASFRFELGRRPSVADHPHVPEMPPPGQVRNAPLETGNDDDNSRRY*