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SCNpilot_expt_500_bf_scaffold_3217

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_3217_1
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..211)
DNA (210bp) protein (70aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
ribosomal large subunit pseudouridine synthase A; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
Pseudouridine synthase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBN7_PELHB
SCNpilot_expt_500_bf_scaffold_3217_2
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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596..1216
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R854_PELHB rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB12055.1}; Flags: Fragment;; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_3217_3
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1286..1468
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RDK4_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB09834.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_3217_4
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1501..2028)
DNA (528bp) protein (176aa)
Deaminase-reductase domain-containing protein n=2 Tax=Ochrobactrum intermedium RepID=C4WJ53_9RHIZ
Deaminase-reductase domain-containing protein {ECO:0000313|EMBL:EEQ96761.1}; TaxID=641118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium LMG 3301.;"
bifunctional deaminase-reductase domain-containing protein
SCNpilot_expt_500_bf_scaffold_3217_5
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2141..2677
DNA (537bp) protein (179aa)
O-6-methylguanine DNA methyltransferase n=1 Tax=Pseudomonas denitrificans ATCC 13867 RepID=M4XF45_PSEDE
Uncharacterized protein {ECO:0000313|EMBL:KKC36625.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
O-6-methylguanine DNA methyltransferase
SCNpilot_expt_500_bf_scaffold_3217_6
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2681..3160
DNA (480bp) protein (160aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EB34_9SPHN
Adenylate cyclase {ECO:0000313|EMBL:KKB09833.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_3217_7
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3271..4023
DNA (753bp) protein (251aa)
Putative oxidoreductase n=1 Tax=Streptomyces ambofaciens ATCC 23877 RepID=A3KJ64_STRAM rbh
Uncharacterized protein {ECO:0000313|EMBL:KFL30856.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
short-chain dehydrogenase rbh
SCNpilot_expt_500_bf_scaffold_3217_8
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4071..4634)
DNA (564bp) protein (188aa)
carbohydrate kinase, thermoresistant glucokinase family (EC:2.7.1.12); K00851 gluconokinase [EC:2.7.1.12]
Carbohydrate kinase, thermoresistant glucokinase family n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y5M1_MESOW
Uncharacterized protein {ECO:0000313|EMBL:KKB09830.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
SCNpilot_expt_500_bf_scaffold_3217_9
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4603..5373)
DNA (771bp) protein (257aa)
idnO; gluconate 5-dehydrogenase (EC:1.1.1.69); K00046 gluconate 5-dehydrogenase [EC:1.1.1.69]
gluconate 5-dehydrogenase n=1 Tax=Rhizobium loti RepID=UPI00035D246B
Gluconate 5-dehydrogenase {ECO:0000313|EMBL:KKB09829.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
SCNpilot_expt_500_bf_scaffold_3217_10
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5576..6994
DNA (1419bp) protein (473aa)
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000256|PIRNR:PIRNR000109}; EC=1.1.1.44 {ECO:0000256|PIRNR:PIRNR000109};; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
6-phosphogluconate dehydrogenase; K00033 6-phosphogluconate dehydrogenase [EC:1.1.1.44] rbh
6-phosphogluconate dehydrogenase, decarboxylating n=1 Tax=Nitratireductor indicus C115 RepID=K2NUL4_9RHIZ rbh
SCNpilot_expt_500_bf_scaffold_3217_11
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7228..7716)
DNA (489bp) protein (163aa)
Acetyltransferase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UXR2_9SPHN
Acetyltransferase {ECO:0000313|EMBL:KKB10364.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
N-acetyltransferase GCN5
SCNpilot_expt_500_bf_scaffold_3217_12
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7688..8164)
DNA (477bp) protein (159aa)
Tetracycline resistance protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RDJ5_PELHB
Tetracycline resistance protein {ECO:0000313|EMBL:KFC66117.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
tetracycline resistance protein; K08151 MFS transporter, DHA1 family, tetracycline resistance protein
Displaying 12 items

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