ggKbase home page

SCNpilot_expt_500_bf_scaffold_3331_3

Organism: SCNPILOT_EXPT_750_P_Devosia_62_26

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 11 / 38 MC: 2
Location: comp(1333..1797)

Top 3 Functional Annotations

Value Algorithm Source
Xylose isomerase {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609}; EC=5.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609};; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.6
  • Coverage: 137.0
  • Bit_score: 275
  • Evalue 4.40e-71
xylose isomerase; K01805 xylose isomerase [EC:5.3.1.5] similarity KEGG
DB: KEGG
  • Identity: 62.2
  • Coverage: 148.0
  • Bit_score: 200
  • Evalue 5.30e-49
Xylose isomerase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8H1_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 62.2
  • Coverage: 148.0
  • Bit_score: 200
  • Evalue 1.70e-48

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Devosia soli → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 465
GTGAGTGATTTTTTCAAGGGCCTGAGCCAGGTCAAGTATGAAGGCCCGCAGAGCAAGAATGCTCTCGCATATCGCCATTACAACAAGGACGAAATGATCGCCGGCAAGCGGATGGAAGACCATATCCGTCCCGCCATCGCTTACTGGCACACCTTCGCCCAGGAAGGCGGCGACCCGTTTGGCGGCCGTACTTTCGATCGTCCCTGGTTCGACAAGGGTCTCGACGGTGCCAAGCTCAAGGCTGAGGTGGCCTTTGAATTCTTCAACCTGATCGACGTCCCTTTCTTCGCCTTCCACGACGTGGACGTGGCCCCGGAAGGCGCGACGCTGGCGGAATCGAACAAGAACCTGCGCGTCATCGGCGACATCATTGCCGAGAAGATGCAGCAGACCGGCAAGAAGCTATGGCGGGTGCCGCCACCAATCCTGATCCGGAAGTTTACGCCTATGCCGCTGGTCAGGTGA
PROTEIN sequence
Length: 155
VSDFFKGLSQVKYEGPQSKNALAYRHYNKDEMIAGKRMEDHIRPAIAYWHTFAQEGGDPFGGRTFDRPWFDKGLDGAKLKAEVAFEFFNLIDVPFFAFHDVDVAPEGATLAESNKNLRVIGDIIAEKMQQTGKKLWRVPPPILIRKFTPMPLVR*