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SCNpilot_expt_500_bf_scaffold_3738_9

Organism: SCNPILOT_EXPT_750_P_Devosia_62_26

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 11 / 38 MC: 2
Location: comp(6689..6877)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Loktanella vestfoldensis RepID=UPI00035DBB93 similarity UNIREF
DB: UNIREF100
  • Identity: 74.2
  • Coverage: 62.0
  • Bit_score: 101
  • Evalue 2.50e-19
RNA polymerase sigma factor {ECO:0000313|EMBL:KKC31049.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.1
  • Coverage: 62.0
  • Bit_score: 114
  • Evalue 5.30e-23
sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 71.7
  • Coverage: 60.0
  • Bit_score: 91
  • Evalue 8.30e-17

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Taxonomy

Devosia psychrophila → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 189
CAGGATCGCGCGCGCATCGAACACTGTCTCGGCACCCTCGAAAGCGATCGCGCCGATGCCGTGCGCGGCGCCTATCTCGATGGCTATTCCTATGAAGAATTGGCTTCCCGTCATGCCGTGCCGTTGAATACCATGCGTACATGGCTGCGGCGCAGCCTCATCAAGCTGAAAGACTGTCTGGCAGCATGA
PROTEIN sequence
Length: 63
QDRARIEHCLGTLESDRADAVRGAYLDGYSYEELASRHAVPLNTMRTWLRRSLIKLKDCLAA*