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SCNpilot_expt_500_bf_scaffold_3428_2

Organism: SCNPILOT_EXPT_750_P_Devosia_62_26

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 11 / 38 MC: 2
Location: 188..883

Top 3 Functional Annotations

Value Algorithm Source
Flagellar basal-body rod modification protein FlgD n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R928_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 50.2
  • Coverage: 229.0
  • Bit_score: 224
  • Evalue 9.60e-56
Flagellar basal-body rod modification protein FlgD {ECO:0000313|EMBL:KFC62439.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.8
  • Coverage: 222.0
  • Bit_score: 317
  • Evalue 2.00e-83
flagellar basal body rod modification protein FlgD; K02389 flagellar basal-body rod modification protein FlgD similarity KEGG
DB: KEGG
  • Identity: 50.2
  • Coverage: 229.0
  • Bit_score: 224
  • Evalue 3.00e-56

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Taxonomy

Devosia sp. LC5 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 696
ATGGCCGTCAGTGGCGTTTCCGGCAGCAATGGTGCCTCGACCCTAGCAGGGTCGCGCTCGACCATTGCGCAGAACTTCGACACCTTTCTCAGCATTCTCACCACCCAACTGAAGAACCAGAACCCTCTGGATCCGTTGGATACCAACCAGTTTACCCAGCAACTGGTGCAGTTCACCGGCGTGGAGCAGCAGCTCAAGACCAACCAGTTCCTCGAGGCGCTGCTGCTCAACACGCAGAACGCCTCGCGCTCCGATACCGTATCCTATATCGGCAAGCAGGTTTCGGCCTCCGGCAAGACCTCCGAACTCAAGAGCGGCAGCGCCGGCTGGAACTACAATGCCTCGGCCCAGGTCGCCAATGCCTCGGTCACCATCAAAAATGCGGCAGGCAATGTGGTTTACACCCAGCAGGGCTCGCTCAATGCCGGACCCGGCTCTTTCGTCTGGGATGGCGTCGGCAGTGACGGCACGCAATATCCCGAAGGCCTTTACAGTCTGGAGATCGTCGGCACCAATCTCTCGGGCAACCCGGTCAAGGTATCCACTGCCTCCGTCGGAGTGGTCACGGCTGTCGACTTCTCCGGCAGCGAGCCGGTGCTTACCGTGGGCCGCTACAAGGTCGCGCTCAAGGATGTCACCGATGTCAGCCTGGTGCCCACCACCACTCCGCCTCCCACCGACGACAAGGACGATTAA
PROTEIN sequence
Length: 232
MAVSGVSGSNGASTLAGSRSTIAQNFDTFLSILTTQLKNQNPLDPLDTNQFTQQLVQFTGVEQQLKTNQFLEALLLNTQNASRSDTVSYIGKQVSASGKTSELKSGSAGWNYNASAQVANASVTIKNAAGNVVYTQQGSLNAGPGSFVWDGVGSDGTQYPEGLYSLEIVGTNLSGNPVKVSTASVGVVTAVDFSGSEPVLTVGRYKVALKDVTDVSLVPTTTPPPTDDKDD*