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SCNpilot_expt_500_bf_scaffold_3932_1

Organism: SCNPILOT_EXPT_750_P_Devosia_62_26

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 11 / 38 MC: 2
Location: 1..393

Top 3 Functional Annotations

Value Algorithm Source
O-antigen polymerase n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0PRD4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 41.9
  • Coverage: 136.0
  • Bit_score: 114
  • Evalue 7.90e-23
Polymerase {ECO:0000313|EMBL:KFL29957.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.9
  • Coverage: 119.0
  • Bit_score: 118
  • Evalue 7.70e-24
exoq1; putative polysaccharide polymerase RF_0568 similarity KEGG
DB: KEGG
  • Identity: 45.3
  • Coverage: 128.0
  • Bit_score: 108
  • Evalue 1.40e-21

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Taxonomy

Devosia riboflavina → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 393
AGGCCCATCACGGGGTACGGGTTCACCCTGTTCTGGACCACCGGGCAGGCGGATATGGTGATGCCCGATGTCGAAACCTGGGCCACCACGGCGTCGGACACGCATAACAGCTATCTTTCGGTCATCCTCGACGGTGGCTTTCCGGCGCTGATCCTGATCCTGATCTGGCTGGTGGTGTTGCCGCTGCGCGATATCAATGCCAGTCGCGCGCCAGGGCCGGGTTGGGAGCTCAATCTGCTGTTCCGACGCATCTGGATGTTCGGCATTCTCCTTGCCAGCATGGAAAGCATTTTTCTCGCTATCAATGGGCCGGTCTGGTTCTCGCTTCTGATGGCGACGTACGGACTGAGGCTCTCGCGCATCTCCTATCTGACCGCACGCCATTCATCCTGA
PROTEIN sequence
Length: 131
RPITGYGFTLFWTTGQADMVMPDVETWATTASDTHNSYLSVILDGGFPALILILIWLVVLPLRDINASRAPGPGWELNLLFRRIWMFGILLASMESIFLAINGPVWFSLLMATYGLRLSRISYLTARHSS*